RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ADGRA2Q96PE1 1338 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 OCRLQ01968 901 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 DIS3L2Q8IYB7 885 aaKnown RBP8.56□□□□□ -1.04
HTT-201ENST00000355072 LPIN2Q92539 896 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 PACSIN1Q9BY11 444 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ANTXR1Q9H6X2 564 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 EHD2Q9NZN4 543 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 ARAP3Q8WWN8 1544 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 EME1Q96AY2 570 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 MEIS3Q99687 375 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 GPR108Q9NPR9 543 aa8.56□□□□□ -1.04
HTT-201ENST00000355072 KATNA1O75449 491 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 NEK10Q6ZWH5 1172 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 IFNB1P01574 187 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 KCNA3P22001 575 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SERPINH1P50454 418 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 ARMCX4Q5H9R4 360 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 A2MP01023 1474 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 E9PCH4 1651 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 NEXMIFQ5QGS0 1516 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 WDR17Q8IZU2 1322 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 ENKURQ8TC29 256 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 HDAC11Q96DB2 347 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 ABHD10Q9NUJ1 306 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 PANK4Q9NVE7 773 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 FBXO28Q9NVF7 368 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 CAPN11Q9UMQ6 739 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 CACNA2D2Q9NY47 1150 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 ITPRIPL1Q6GPH6 555 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 CLEC4MQ9H2X3 399 aaPredicted RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 GTPBP10A4D1E9 387 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 RPL22P35268 128 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 CARSP49589 748 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 KLHL7Q8IXQ5 586 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SCFD1Q8WVM8 642 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 AZI2Q9H6S1 392 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 ETAA1Q9NY74 926 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 NRBP1Q9UHY1 535 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SPATA31E1Q6ZUB1 1445 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TMEM110-MUSTN1A8MSY1 372 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 H3BRJ5 948 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 PDE9AO76083 593 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TRIM59Q8IWR1 403 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 KRT35Q92764 455 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 AATFQ9NY61 560 aaKnown RBP eCLIP8.55□□□□□ -1.04
HTT-201ENST00000355072 SAGE2PA6NJ88 616 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SGK1O00141 431 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 NR2F2P24468 414 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 AARSP49588 968 aaKnown RBP eCLIP8.55□□□□□ -1.04
HTT-201ENST00000355072 COPS2P61201 443 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TMEM132EQ6IEE7 984 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TRPM8Q7Z2W7 1104 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 CNOT6LQ96LI5 555 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 CHPF2Q9P2E5 772 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SF3B1O75533 1304 aaKnown RBP eCLIP8.55□□□□□ -1.045e-7■■■■■ 91.1
HTT-201ENST00000355072 ESYT2A0FGR8 921 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 RPN1P04843 607 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 KYAT1Q16773 422 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 HSPA4LO95757 839 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 SNAP25P60880 206 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TFDP1Q14186 410 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 TLK2Q86UE8 772 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 NT5C1BQ96P26 610 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 EFR3BQ9Y2G0 817 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 RP1L1Q8IWN7 2480 aaPredicted RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 MAGOHBQ96A72 148 aaKnown RBP8.55□□□□□ -1.04
HTT-201ENST00000355072 TRIM31Q9BZY9 425 aa8.55□□□□□ -1.04
HTT-201ENST00000355072 KPNA4O00629 521 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 KRT20P35900 424 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 ARL4AP40617 200 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 AP3M2P53677 418 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 ITGA1P56199 1179 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 WLSQ5T9L3 541 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 PLD3Q8IV08 490 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 BTBD6Q96KE9 485 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 RNF34Q969K3 372 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 MYD88Q99836 296 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 PSMC3IPQ9P2W1 217 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 C1DQ13901 141 aaKnown RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 TIMM50Q3ZCQ8 353 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 ZBTB8OSQ8IWT0 167 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 RMND5BQ96G75 393 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
HTT-201ENST00000355072 GPAA1O43292 621 aa8.54□□□□□ -1.04
HTT-201ENST00000355072 HAUS5O94927 633 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms