RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GPR182O15218 404 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 EOMESO95936 686 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 KLRC1P26715 233 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 PPM1AP35813 382 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 TDGQ13569 410 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 MTMR1Q13613 665 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 ODR4Q5SWX8 454 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 CYB5R4Q7L1T6 521 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 PPP1R16BQ96T49 567 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 TMEM117Q9H0C3 514 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 USTQ9Y2C2 406 aa18.15■□□□□ 0.5
DDX55-202ENST00000354291 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
DDX55-202ENST00000354291 LOXHD1Q8IVV2 1947 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 STAT5BP51692 787 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 FAM189BP81408 668 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 KIAA1841Q6NSI8 718 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 ABI1Q8IZP0 508 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 TMEM40Q8WWA1 233 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 RIN2Q8WYP3 895 aaPredicted RBP18.14■□□□□ 0.49
DDX55-202ENST00000354291 ACSF2Q96CM8 615 aaPredicted RBP18.14■□□□□ 0.49
DDX55-202ENST00000354291 CASD1Q96PB1 797 aa18.14■□□□□ 0.49
DDX55-202ENST00000354291 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
DDX55-202ENST00000354291 RFX1P22670 979 aa18.13■□□□□ 0.49
DDX55-202ENST00000354291 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
DDX55-202ENST00000354291 TMC5Q6UXY8 1006 aa18.13■□□□□ 0.49
DDX55-202ENST00000354291 DCLK2Q8N568 766 aa18.13■□□□□ 0.49
DDX55-202ENST00000354291 ELAC1Q9H777 363 aaKnown RBP18.13■□□□□ 0.49
DDX55-202ENST00000354291 SLC9A2Q9UBY0 812 aa18.13■□□□□ 0.49
DDX55-202ENST00000354291 PIK3CDO00329 1044 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
DDX55-202ENST00000354291 EPCAMP16422 314 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 FAM43BQ6ZT52 329 aaPredicted RBP18.12■□□□□ 0.49
DDX55-202ENST00000354291 PLPPR4Q7Z2D5 763 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 KIAA0319LQ8IZA0 1049 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 RNF169Q8NCN4 708 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 JADE2Q9NQC1 790 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 UBIAD1Q9Y5Z9 338 aa18.12■□□□□ 0.49
DDX55-202ENST00000354291 KMT2BQ9UMN6 2715 aaPredicted RBP18.12■□□□□ 0.49
DDX55-202ENST00000354291 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 HOXA2O43364 376 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 ACTR2P61160 394 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 RSPO4Q2I0M5 234 aaPredicted RBP18.11■□□□□ 0.49
DDX55-202ENST00000354291 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 OTOP3Q7RTS5 596 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 FAM228AQ86W67 206 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 FEZF2Q8TBJ5 459 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 OSMRQ99650 979 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 DSCC1Q9BVC3 393 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 KCNK12Q9HB15 430 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 DLL3Q9NYJ7 618 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 DUSP12Q9UNI6 340 aa18.11■□□□□ 0.49
DDX55-202ENST00000354291 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.1■□□□□ 0.49
DDX55-202ENST00000354291 SPDYE4A6NLX3 237 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 MAFGO15525 162 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 METAP2P50579 478 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX55-202ENST00000354291 TRDNQ13061 729 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 CABP7Q86V35 215 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 SLC39A11Q8N1S5 342 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 RUBCNQ92622 972 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
DDX55-202ENST00000354291 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 RNF19AQ9NV58 838 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 OTOGLQ3ZCN5 2332 aa18.1■□□□□ 0.49
DDX55-202ENST00000354291 ERICH2A1L162 156 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 NARSO43776 548 aaKnown RBP18.09■□□□□ 0.49
DDX55-202ENST00000354291 CFHP08603 1231 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 ALDH7A1P49419 539 aaKnown RBP18.09■□□□□ 0.49
DDX55-202ENST00000354291 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
DDX55-202ENST00000354291 TROAPQ12815 778 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 DSC3Q14574 896 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 VPS52Q8N1B4 723 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 SDF4Q9BRK5 362 aa18.09■□□□□ 0.49
DDX55-202ENST00000354291 ZSCAN20P17040 1043 aaPredicted RBP18.08■□□□□ 0.48
DDX55-202ENST00000354291 WTAPQ15007 396 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 UBE2SQ16763 222 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 ZC3H14Q6PJT7 736 aaKnown RBP18.08■□□□□ 0.48
DDX55-202ENST00000354291 CCDC149Q6ZUS6 474 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 CATIPQ7Z7H3 387 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 TMEM169Q96HH4 297 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 KCNH7Q9NS40 1196 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 SEC63Q9UGP8 760 aaKnown RBP18.08■□□□□ 0.48
DDX55-202ENST00000354291 GPR179Q6PRD1 2367 aa18.08■□□□□ 0.48
DDX55-202ENST00000354291 KRBA1A5PL33 1030 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 BACH1O14867 736 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 HBP1O60381 514 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 VTNP04004 478 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 BCAR1P56945 870 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 GPR149Q86SP6 731 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 ECHDC2Q86YB7 292 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 METTL13Q8N6R0 699 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 CA14Q9ULX7 337 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 PCDHA6Q9UN73 950 aa18.07■□□□□ 0.48
DDX55-202ENST00000354291 PCDHA8Q9Y5H6 950 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms