RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 LRRC55Q6ZSA7 311 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 APBB1IPQ7Z5R6 666 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 NEK9Q8TD19 979 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ATP8B4Q8TF62 1192 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TEKT4Q8WW24 435 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 RAB3IPQ96QF0 476 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 STMN4Q9H169 189 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TNRC6CQ9HCJ0 1690 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 RGL1Q9NZL6 768 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 AIPL1Q9NZN9 384 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 KAT6BQ8WYB5 2073 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 COL5A3P25940 1745 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 RGS16O15492 202 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 HIP1RO75146 1068 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 SHBGP04278 402 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ATP6V1C1P21283 382 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ALDH3A1P30838 453 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GSTO1P78417 241 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MXRA7P84157 204 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 DIXDC1Q155Q3 683 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 CNGA2Q16280 664 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 CEP63Q96MT8 703 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 PLIN2Q99541 437 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 PACSIN1Q9BY11 444 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 RXFP1Q9HBX9 757 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 MCM9Q9NXL9 1143 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 BTG4Q9NY30 223 aa11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 TTC7AQ9ULT0 858 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-202ENST00000348749 COL4A1P02462 1669 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 CYTH3O43739 400 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 CCNT1O60563 726 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 ANXA13P27216 316 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 PMS2P54278 862 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 NAPAP54920 295 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 PPP4CP60510 307 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 LAMB3Q13751 1172 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 PPP2R5EQ16537 467 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 PARP6Q2NL67 630 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 DENND2CQ68D51 928 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 RPUSD2Q8IZ73 545 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 LARP4BQ92615 738 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 BICD1Q96G01 975 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 MTMR9Q96QG7 549 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 TRIM7Q9C029 511 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 WDR35Q9P2L0 1181 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 SUCLA2Q9P2R7 463 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 STXBP5LQ9Y2K9 1186 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 ARL2BPQ9Y2Y0 163 aa11.18□□□□□ -0.62
CHRNA1-202ENST00000348749 BAG3O95817 575 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 CYP2D6P10635 497 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 ITGA4P13612 1032 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 ACADSP16219 412 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 CALB2P22676 271 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 KLHL30Q0D2K2 578 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 CCDC15Q0P6D6 951 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 LETM2Q2VYF4 491 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 DUPD1Q68J44 220 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 TAOK1Q7L7X3 1001 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 KIF2BQ8N4N8 673 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 EZH1Q92800 747 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 DPH5Q9H2P9 285 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 BLOC1S4Q9NUP1 217 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 PRKAG3Q9UGI9 489 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 STK38LQ9Y2H1 464 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 LOC102724428A0A0B4J2F2 783 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SMCO2A6NFE2 343 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 FAM187AA6NFU0 413 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
CHRNA1-202ENST00000348749 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms