RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 DGKHQ86XP1 1220 aa18.7■□□□□ 0.58
SPAST-202ENST00000345662 RBM41Q96IZ5 413 aaKnown RBP18.7■□□□□ 0.58
SPAST-202ENST00000345662 HSPA4LO95757 839 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 PRPSAP1Q14558 356 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 CYB5D1Q6P9G0 228 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 RAB44Q7Z6P3 723 aaPredicted RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 SESTD1Q86VW0 696 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 SNF8Q96H20 258 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 RNPC3Q96LT9 517 aaKnown RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 RBM12Q9NTZ6 932 aaKnown RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 STAT2P52630 851 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 SPOPLQ6IQ16 392 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 WDR93Q6P2C0 686 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 TMEM154Q6P9G4 183 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 MCF2L2Q86YR7 1114 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 GLG1Q92896 1179 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 HEMGNQ9BXL5 484 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 ZBBXA8MT70 800 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 EPHA10Q5JZY3 1008 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 TRMT10CQ7L0Y3 403 aaKnown RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 RFFLQ8WZ73 363 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 RAD54LQ92698 747 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 TRAF3IP3Q9Y228 551 aa18.69■□□□□ 0.58
SPAST-202ENST00000345662 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
SPAST-202ENST00000345662 ESYT2A0FGR8 921 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 CASP2P42575 452 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 PCYT1AP49585 367 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 POLGP54098 1239 aaPredicted RBP18.68■□□□□ 0.58
SPAST-202ENST00000345662 DNAAF3Q8N9W5 541 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 NOD2Q9HC29 1040 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 KMT5AQ9NQR1 393 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 IPO11Q9UI26 975 aaKnown RBP18.68■□□□□ 0.58
SPAST-202ENST00000345662 L1RE1Q9UN81 338 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 ZNF711Q9Y462 761 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 NR3C1P04150 777 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 SRGNP10124 158 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 ALAS1P13196 640 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 ALCAMQ13740 583 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 RASGRF1Q13972 1273 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 STOX1Q6ZVD7 989 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 TRIM59Q8IWR1 403 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
SPAST-202ENST00000345662 PYGBP11216 843 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 FGFR4P22455 802 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 KRT39Q6A163 491 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 TRIM15Q9C019 465 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 BHMT2Q9H2M3 363 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 PGM1P36871 562 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 COASYQ13057 564 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 SGMS1Q86VZ5 419 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 DNAJC9Q8WXX5 260 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 SENP1Q9P0U3 644 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 FIS1Q9Y3D6 152 aa18.68■□□□□ 0.58
SPAST-202ENST00000345662 H7C1W4 665 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 CCDC92Q53HC0 331 aaPredicted RBP18.67■□□□□ 0.58
SPAST-202ENST00000345662 SLC26A7Q8TE54 656 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 SSU72P8A0A1W2PR75 194 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 CCDC22O60826 627 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 KCNA3P22001 575 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 RASSF3Q86WH2 238 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 WNT8AQ9H1J5 351 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 LAMC1P11047 1609 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 NVLO15381 856 aaKnown RBP18.67■□□□□ 0.58
SPAST-202ENST00000345662 GYPCP04921 128 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 STAT4Q14765 748 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 UBE2SQ16763 222 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 TEX2Q8IWB9 1127 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 JDP2Q8WYK2 163 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 ZNF804BA4D1E1 1349 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 USP42Q9H9J4 1324 aaKnown RBP18.67■□□□□ 0.58
SPAST-202ENST00000345662 ZBED1O96006 694 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 TXNRD1Q16881 649 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 KDM7AQ6ZMT4 941 aa18.67■□□□□ 0.58
SPAST-202ENST00000345662 CCDC124Q96CT7 223 aaKnown RBP18.67■□□□□ 0.58
SPAST-202ENST00000345662 DNAJC6O75061 913 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 SRGAP2BP0DMP2 458 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 CARSP49589 748 aaKnown RBP18.66■□□□□ 0.58
SPAST-202ENST00000345662 NCAPHQ15003 741 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 KCTD1Q719H9 257 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 LONP2Q86WA8 852 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 OR2W6PQ8NHA6 318 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 ZNF564Q8TBZ8 553 aaPredicted RBP18.66■□□□□ 0.58
SPAST-202ENST00000345662 BRIP1Q9BX63 1249 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 POTEMA6NI47 508 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 KITP10721 976 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 C3orf20Q8ND61 904 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 ENGASEQ8NFI3 743 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPAST-202ENST00000345662 NOP14P78316 857 aaKnown RBP18.66■□□□□ 0.58
SPAST-202ENST00000345662 TEDDM1Q5T9Z0 273 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms