RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CASC1Q6TDU7 716 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 AACSQ86V21 672 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 RIPOR3Q96MK2 946 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 NELL2Q99435 816 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 JPH2Q9BR39 696 aaPredicted RBP8.21□□□□□ -1.1
ZNF540-202ENST00000343599 RXFP1Q9HBX9 757 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.1
ZNF540-202ENST00000343599 MAGEB2O15479 319 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 ZNF623O75123 536 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 SYN1P17600 705 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 PTGISQ16647 500 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 NLRP7Q8WX94 980 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 NEUROD6Q96NK8 337 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 EXOC6BQ9Y2D4 811 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 UBIAD1Q9Y5Z9 338 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 SMCHD1A6NHR9 2005 aa8.21□□□□□ -1.1
ZNF540-202ENST00000343599 AP5Z1O43299 807 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 HNRNPDQ14103 355 aaKnown RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 BMP2KLQ5H9B9 411 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 ANKRD54Q6NXT1 300 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 ZC3H14Q6PJT7 736 aaKnown RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 LEMD2Q8NC56 503 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 SPATA18Q8TC71 538 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 DNASE1L2Q92874 299 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 PRMT8Q9NR22 394 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 RXFP3Q9NSD7 469 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 KIF2AO00139 706 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 ADCY6O43306 1168 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 COQ9O75208 318 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 CLCN6P51797 869 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 MTA1Q13330 715 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 MRPL10Q7Z7H8 261 aaKnown RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 FIBCD1Q8N539 461 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 PRSS33Q8NF86 280 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 SYTL5Q8TDW5 730 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 SLC22A17Q8WUG5 538 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 ESR2Q92731 530 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 EPB41L4AQ9HCS5 686 aaPredicted RBP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.2□□□□□ -1.1
ZNF540-202ENST00000343599 OBP2AQ9NY56 170 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 TRPV2Q9Y5S1 764 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 IGSF9BQ9UPX0 1349 aa8.2□□□□□ -1.1
ZNF540-202ENST00000343599 GREB1Q4ZG55 1949 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 DKC1O60832 514 aaKnown RBP eCLIP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SLU7O95391 586 aaKnown RBP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 RLBP1P12271 317 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 ABL2P42684 1182 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 GALNT17Q6IS24 598 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SYNPOQ8N3V7 929 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 KLHDC4Q8TBB5 520 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 AMNQ9BXJ7 453 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 TMEM117Q9H0C3 514 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SMARCAD1Q9H4L7 1026 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 ERVK-5Q9HDB9 667 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 DLL3Q9NYJ7 618 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 CEP131Q9UPN4 1083 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SORCS3Q9UPU3 1222 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 PCDHGA2Q9Y5H1 932 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 PQBP1O60828 265 aaKnown RBP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 NBNO60934 754 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SMC2O95347 1197 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 C6orf222P0C671 652 aaPredicted RBP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 ASTLQ6HA08 431 aaPredicted RBP8.19□□□□□ -1.1
ZNF540-202ENST00000343599 EFCAB13Q8IY85 973 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 KCNB2Q92953 911 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 TATDN2Q93075 761 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 MIEF2Q96C03 454 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 FUCA2Q9BTY2 467 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 ADAM7Q9H2U9 754 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 SH3GLB2Q9NR46 395 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 RPS6KL1Q9Y6S9 549 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 CLUHO75153 1309 aa8.19□□□□□ -1.1
ZNF540-202ENST00000343599 MYADML2A6NDP7 307 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 ANHXE9PGG2 379 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 IPO7O95373 1038 aaKnown RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TPM1P09493 284 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 CNGA1P29973 690 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 CIITAP33076 1130 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 CCDC183Q5T5S1 534 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 JAKMIP3Q5VZ66 844 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 ZNF410Q86VK4 478 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 MKNK2Q9HBH9 465 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 ZDHHC7Q9NXF8 308 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 CCPG1Q9ULG6 757 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 HELZP42694 1942 aaKnown RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 PRR23AA6NEV1 266 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 TMEM189-UBE2V1I3L0A0 370 aa8.18□□□□□ -1.1
ZNF540-202ENST00000343599 POLR3GO15318 223 aaPredicted RBP8.18□□□□□ -1.1
ZNF540-202ENST00000343599 PTGS1P23219 599 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms