RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ZNF862O60290 1169 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 NEMFO60524 1076 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 COL9A1P20849 921 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 MCM7P33993 719 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 MRPS6P82932 125 aaKnown RBP20.25■□□□□ 0.83
USF2-202ENST00000343550 GPM6BQ13491 265 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 CALCRLQ16602 461 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 IER5Q5VY09 327 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 TSHZ1Q6ZSZ6 1077 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 CKAP2LQ8IYA6 745 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 TRAPPC12Q8WVT3 735 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 BBXQ8WY36 941 aaPredicted RBP20.25■□□□□ 0.83
USF2-202ENST00000343550 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
USF2-202ENST00000343550 FAM49AQ9H0Q0 323 aaPredicted RBP20.25■□□□□ 0.83
USF2-202ENST00000343550 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 BDP1A6H8Y1 2624 aa20.25■□□□□ 0.83
USF2-202ENST00000343550 IGSF9BQ9UPX0 1349 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 TRAPPC10P48553 1259 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 ZNF174Q15697 407 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 UGCGQ16739 394 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 MCTP1Q6DN14 999 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
USF2-202ENST00000343550 FIBCD1Q8N539 461 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 PCDHA2Q9Y5H9 948 aa20.24■□□□□ 0.83
USF2-202ENST00000343550 MYH9P35579 1960 aaKnown RBP20.24■□□□□ 0.83
USF2-202ENST00000343550 WDR81Q562E7 1941 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 ZBTB42B2RXF5 422 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
USF2-202ENST00000343550 SPIRE1Q08AE8 756 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 ZNF484Q5JVG2 852 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 TMEM60Q9H2L4 133 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 AGO3Q9H9G7 860 aaKnown RBP20.23■□□□□ 0.83
USF2-202ENST00000343550 COL4A6Q14031 1691 aa20.23■□□□□ 0.83
USF2-202ENST00000343550 KCNA5P22460 613 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 KLRC1P26715 233 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 TXKP42681 527 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 LEXMQ3ZCV2 418 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 TIGD5Q53EQ6 642 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 TTC38Q5R3I4 469 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 BANK1Q8NDB2 785 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 TTC12Q9H892 705 aaPredicted RBP20.22■□□□□ 0.83
USF2-202ENST00000343550 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
USF2-202ENST00000343550 SQORQ9Y6N5 450 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 M0QZ92 97 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 CD52P31358 61 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 TMEM62Q0P6H9 643 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 ORC2Q13416 577 aaPredicted RBP20.22■□□□□ 0.83
USF2-202ENST00000343550 EPHA7Q15375 998 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 FAM167AQ96KS9 214 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 C1QTNF1Q9BXJ1 281 aa20.22■□□□□ 0.83
USF2-202ENST00000343550 COL1A2P08123 1366 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 STBD1O95210 358 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 OATP04181 439 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 RB1P06400 928 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 CTNNB1P35222 781 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 BMPR1AP36894 532 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 PRKCEQ02156 737 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 NBR1Q14596 966 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 C4orf32Q8N8J7 132 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 RC3H2Q9HBD1 1191 aaKnown RBP20.21■□□□□ 0.83
USF2-202ENST00000343550 TRPV2Q9Y5S1 764 aa20.21■□□□□ 0.83
USF2-202ENST00000343550 SMIM35A0A1B0GVV1 85 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 DGKIO75912 1065 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 LINC00271P0C7V0 271 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 PSMC5P62195 406 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 NCAPH2Q6IBW4 605 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 RTN4RL1Q86UN2 441 aaPredicted RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 NME8Q8N427 588 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 ZNF689Q96CS4 500 aaPredicted RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 NIFKQ9BYG3 293 aaKnown RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 CELF4Q9BZC1 486 aaKnown RBP20.2■□□□□ 0.82
USF2-202ENST00000343550 FOXD4L1Q9NU39 408 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 RWDD3Q9Y3V2 267 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 PCDHB6Q9Y5E3 794 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 BRWD1Q9NSI6 2320 aa20.2■□□□□ 0.82
USF2-202ENST00000343550 PDCP20941 246 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 QARSP47897 775 aaKnown RBP20.19■□□□□ 0.82
USF2-202ENST00000343550 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
USF2-202ENST00000343550 XKR3Q5GH77 459 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 TCEAL5Q5H9L2 206 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 LINC01599Q8WXQ3 324 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 CLP1Q92989 425 aaKnown RBP20.19■□□□□ 0.82
USF2-202ENST00000343550 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
USF2-202ENST00000343550 NSUN3Q9H649 340 aaKnown RBP20.19■□□□□ 0.82
USF2-202ENST00000343550 EPHX3Q9H6B9 360 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 RGL1Q9NZL6 768 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 PADI3Q9ULW8 664 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
USF2-202ENST00000343550 SLITRK3O94933 977 aa20.18■□□□□ 0.82
USF2-202ENST00000343550 RILPL1Q5EBL4 403 aa20.18■□□□□ 0.82
USF2-202ENST00000343550 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
USF2-202ENST00000343550 CRIPAKQ8N1N5 446 aa20.18■□□□□ 0.82
USF2-202ENST00000343550 HSD17B14Q9BPX1 270 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms