RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 TEX13BQ9BXU2 312 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 HIP1RO75146 1068 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 NMT1P30419 496 aaKnown RBP16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 ZNF394Q53GI3 561 aa16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 LIMA1Q9UHB6 759 aaKnown RBP16.86■□□□□ 0.29
CARMIL3-201ENST00000342740 MYMKA6NI61 221 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 TRIM49P0CI25 452 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 TRIM49CP0CI26 452 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 CLCN6P51797 869 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 NPHP3-ACAD11A0A0J9YXS1 232 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 PALMO75781 387 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 ZNF667Q5HYK9 610 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 RINT1Q6NUQ1 792 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 RFX6Q8HWS3 928 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 MTRQ99707 1265 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 AP1M1Q9BXS5 423 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 NBPF3Q9H094 633 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 A0A1B0GTH6 734 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 SGK1O00141 431 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 ECEL1O95672 775 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 SRGNP10124 158 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 ZSCAN26Q16670 478 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 ATP8A1Q9Y2Q0 1164 aa16.85■□□□□ 0.29
CARMIL3-201ENST00000342740 PDXKO00764 312 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SEC23AQ15436 765 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 ATP2A3Q93084 1043 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 CAPS2Q9BXY5 557 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 TCRBV5S4A2TA0A5A2 114 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SLC7A5Q01650 507 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 PTPAQ15257 358 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 MAP7D1Q3KQU3 841 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 OR6B2Q6IFH4 312 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 CCDC13Q8IYE1 715 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SAAL1Q96ER3 474 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 HEXIM2Q96MH2 286 aaKnown RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 CALN1Q9BXU9 219 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 AGXT2Q9BYV1 514 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 LRRD1A4D1F6 860 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SRGAP2O75044 1071 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 KRT1P04264 644 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 NFX1Q12986 1120 aaKnown RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 TTLL4Q14679 1199 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 DRAP1Q14919 205 aaPredicted RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 ANGEL2Q5VTE6 544 aaKnown RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 IFT122Q9HBG6 1241 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 RNF40O75150 1001 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 ZSCAN20P17040 1043 aaPredicted RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 MTF1Q14872 753 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 FBXO38Q6PIJ6 1188 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 BCAS4Q8TDM0 211 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 PRMT6Q96LA8 375 aaPredicted RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 RTFDC1Q9BY42 306 aaPredicted RBP16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SEPT10Q9P0V9 454 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 SLC9A2Q9UBY0 812 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 CAPN11Q9UMQ6 739 aa16.84■□□□□ 0.29
CARMIL3-201ENST00000342740 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.29
CARMIL3-201ENST00000342740 SPON1Q9HCB6 807 aa16.83■□□□□ 0.29
CARMIL3-201ENST00000342740 ADAM22Q9P0K1 906 aa16.83■□□□□ 0.29
CARMIL3-201ENST00000342740 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.29
CARMIL3-201ENST00000342740 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 ANO9A1A5B4 782 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 I3L4J1 428 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 ERICH1Q86X53 443 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 RAB3IL1Q8TBN0 382 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 MYOZ2Q9NPC6 264 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 FGGP02679 453 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 GMPSP49915 693 aaPredicted RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 MRPS25P82663 173 aaKnown RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 DHX9Q08211 1270 aaKnown RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 ZNF568Q3ZCX4 644 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 CYFIP1Q7L576 1253 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 EDEM3Q9BZQ6 932 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 POLR3FQ9H1D9 316 aaPredicted RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 DEFB129Q9H1M3 183 aa16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 JPH1Q9HDC5 661 aaPredicted RBP16.83■□□□□ 0.28
CARMIL3-201ENST00000342740 EIF3CLB5ME19 914 aaKnown RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 DYNLT1P63172 113 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 TTC31Q49AM3 519 aaPredicted RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 KRT39Q6A163 491 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 RSRC2Q7L4I2 434 aaKnown RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 EIF3CQ99613 913 aaKnown RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 MAD1L1Q9Y6D9 718 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 C19orf81C9J6K1 198 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 ARHGAP25P42331 645 aa16.82■□□□□ 0.28
CARMIL3-201ENST00000342740 SLC12A2P55011 1212 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms