RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 KCNMB3Q9NPA1 279 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 LRFN2Q9ULH4 789 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 LIMCH1Q9UPQ0 1083 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 TFF2Q03403 129 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 TBC1D8BQ0IIM8 1120 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 TARBP2Q15633 366 aaKnown RBP22.67■■□□□ 1.22
SYNE2-201ENST00000341472 CRIPAKQ8N1N5 446 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 LINC01465Q8N7H1 131 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 MRPL38Q96DV4 380 aaKnown RBP22.67■■□□□ 1.22
SYNE2-201ENST00000341472 ADAM2Q99965 735 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 RNF216Q9NWF9 866 aaPredicted RBP22.67■■□□□ 1.22
SYNE2-201ENST00000341472 RWDD3Q9Y3V2 267 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 PCDHB7Q9Y5E2 793 aa22.67■■□□□ 1.22
SYNE2-201ENST00000341472 ADGRA3Q8IWK6 1321 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 DENND3A2RUS2 1198 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 TBX3O15119 743 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 JAK2O60674 1132 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 STBD1O95210 358 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 IBSPP21815 317 aaPredicted RBP22.66■■□□□ 1.22
SYNE2-201ENST00000341472 CTNNB1P35222 781 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 SARSP49591 514 aaKnown RBP22.66■■□□□ 1.22
SYNE2-201ENST00000341472 PSMC5P62195 406 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 NR5A1Q13285 461 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 TRIM29Q14134 588 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 EARS2Q5JPH6 523 aaKnown RBP22.66■■□□□ 1.22
SYNE2-201ENST00000341472 ADAMTS10Q9H324 1103 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 RC3H2Q9HBD1 1191 aaKnown RBP22.66■■□□□ 1.22
SYNE2-201ENST00000341472 RGS18Q9NS28 235 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 C1orf112Q9NSG2 853 aa22.66■■□□□ 1.22
SYNE2-201ENST00000341472 SEPT9Q9UHD8 586 aaPredicted RBP22.66■■□□□ 1.22
SYNE2-201ENST00000341472 TRANK1O15050 2925 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 EML1O00423 815 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 MGEA5O60502 916 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 BAG4O95429 457 aaKnown RBP22.65■■□□□ 1.22
SYNE2-201ENST00000341472 PPP2R5CQ13362 524 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 MTERF2Q49AM1 385 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 SLC24A5Q71RS6 500 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 FAM228AQ86W67 206 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 CMTR2Q8IYT2 770 aaKnown RBP22.65■■□□□ 1.22
SYNE2-201ENST00000341472 BANK1Q8NDB2 785 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 CLP1Q92989 425 aaKnown RBP22.65■■□□□ 1.22
SYNE2-201ENST00000341472 VAV3Q9UKW4 847 aa22.65■■□□□ 1.22
SYNE2-201ENST00000341472 VCANP13611 3396 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 BTBD18B2RXH4 712 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 DKC1O60832 514 aaKnown RBP eCLIP22.64■■□□□ 1.21
SYNE2-201ENST00000341472 BMP1P13497 986 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 EIF4BP23588 611 aaKnown RBP22.64■■□□□ 1.21
SYNE2-201ENST00000341472 QARSP47897 775 aaKnown RBP22.64■■□□□ 1.21
SYNE2-201ENST00000341472 DNM2P50570 870 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 CDC42EP1Q00587 391 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 HAS1Q92839 578 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 TNFRSF25Q93038 417 aa22.64■■□□□ 1.21
SYNE2-201ENST00000341472 C11orf84Q9BUA3 381 aaPredicted RBP22.64■■□□□ 1.21
SYNE2-201ENST00000341472 TMEM150BA6NC51 233 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 FAM205CA6NFA0 338 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 C5orf67F2Z3F1 127 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 MMP1P03956 469 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 P4HBP07237 508 aaKnown RBP22.63■■□□□ 1.21
SYNE2-201ENST00000341472 FOSBP53539 338 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 FAM189BP81408 668 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 EPHA7Q15375 998 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 SLFN12Q8IYM2 578 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 ADAMTS19Q8TE59 1207 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 ZNF668Q96K58 619 aaPredicted RBP22.63■■□□□ 1.21
SYNE2-201ENST00000341472 SCLT1Q96NL6 688 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 PLVAPQ9BX97 442 aa22.63■■□□□ 1.21
SYNE2-201ENST00000341472 C9IYK1 514 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 LINC00271P0C7V0 271 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 ZSCAN20P17040 1043 aaPredicted RBP22.62■■□□□ 1.21
SYNE2-201ENST00000341472 GPC3P51654 580 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 PAN2Q504Q3 1202 aaKnown RBP22.62■■□□□ 1.21
SYNE2-201ENST00000341472 ANO5Q75V66 913 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 DIS3L2Q8IYB7 885 aaKnown RBP22.62■■□□□ 1.21
SYNE2-201ENST00000341472 CEP89Q96ST8 783 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 JPH2Q9BR39 696 aaPredicted RBP22.62■■□□□ 1.21
SYNE2-201ENST00000341472 SH2D3AQ9BRG2 576 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 MRPL42Q9Y6G3 142 aaKnown RBP22.62■■□□□ 1.21
SYNE2-201ENST00000341472 PTPRSQ13332 1948 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 MICAL3Q7RTP6 2002 aa22.62■■□□□ 1.21
SYNE2-201ENST00000341472 IGKV6-21A0A0C4DH24 114 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 MAFO75444 373 aaPredicted RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 DARSP14868 501 aaKnown RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 DSC3Q14574 896 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 SAFBQ15424 915 aaKnown RBP eCLIP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 TIGD5Q53EQ6 642 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 NLRP7Q8WX94 980 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 ZSCAN31Q96LW9 406 aaPredicted RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 UHRF1Q96T88 793 aaPredicted RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 LLPHQ9BRT6 129 aaKnown RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 LMAN2LQ9H0V9 348 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 ATP6V0A4Q9HBG4 840 aa22.61■■□□□ 1.21
SYNE2-201ENST00000341472 SUCLA2Q9P2R7 463 aaPredicted RBP22.61■■□□□ 1.21
SYNE2-201ENST00000341472 GRM6O15303 877 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 GATMP50440 423 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 KCNQ1P51787 676 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 ST3GAL1Q11201 340 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 DRP2Q13474 957 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 C8orf34Q49A92 452 aa22.6■■□□□ 1.21
SYNE2-201ENST00000341472 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms