RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ZDHHC14Q8IZN3 488 aa18.72■□□□□ 0.59
NECTIN1-202ENST00000340882 SRBD1Q8N5C6 995 aaKnown RBP18.72■□□□□ 0.59
NECTIN1-202ENST00000340882 OSMRQ99650 979 aa18.72■□□□□ 0.59
NECTIN1-202ENST00000340882 TMEM117Q9H0C3 514 aa18.72■□□□□ 0.59
NECTIN1-202ENST00000340882 ELAC1Q9H777 363 aaKnown RBP18.72■□□□□ 0.59
NECTIN1-202ENST00000340882 CACNA1BQ00975 2339 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 ERICH2A1L162 156 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 HIP1O00291 1037 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 MAFGO15525 162 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 ATG7O95352 703 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 MTHFRP42898 656 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 PTH1RQ03431 593 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 TRDNQ13061 729 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 ANGPT1Q15389 498 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 TDRD5Q8NAT2 981 aaKnown RBP18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 ZNF558Q96NG5 402 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 MXRA8Q9BRK3 442 aa18.71■□□□□ 0.59
NECTIN1-202ENST00000340882 IGKV6D-21A0A0A0MT36 114 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 NT5C1B-RDH14C9J2C7 533 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 E7EWF7 191 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 GPR182O15218 404 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 CCNE2O96020 404 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 AOC1P19801 751 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 SMC5Q8IY18 1101 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 CCDC105Q8IYK2 499 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 SLC39A11Q8N1S5 342 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 AUTS2Q8WXX7 1259 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 TNPO1Q92973 898 aaKnown RBP18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 SPG21Q9NZD8 308 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 NFASCO94856 1347 aa18.7■□□□□ 0.58
NECTIN1-202ENST00000340882 NCOR2Q9Y618 2525 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 GPR32O75388 356 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 VTNP04004 478 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 EPCAMP16422 314 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 ATP4AP20648 1035 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 CRYBB1P53674 252 aaPredicted RBP18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 KRT17Q04695 432 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 CLLU1OSQ5K130 101 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 KIAA1841Q6NSI8 718 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 CHD1LQ86WJ1 897 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 PGBD1Q96JS3 809 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 DBR1Q9UK59 544 aaKnown RBP18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 FANCMQ8IYD8 2048 aa18.69■□□□□ 0.58
NECTIN1-202ENST00000340882 CEP250Q9BV73 2442 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 SPDYE3A6NKU9 549 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 DDX39AO00148 427 aaKnown RBP18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 HBP1O60381 514 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 CXCL14O95715 111 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 EOMESO95936 686 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 RXRAP19793 462 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 CA8P35219 290 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 PPM1AP35813 382 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 COL9A3Q14050 684 aaPredicted RBP18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 CCDC60Q8IWA6 550 aaPredicted RBP18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 LRRC43Q8N309 656 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 DTWD2Q8NBA8 298 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 MAP3K14Q99558 947 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 LY9Q9HBG7 655 aa18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 AGO4Q9HCK5 861 aaKnown RBP18.68■□□□□ 0.58
NECTIN1-202ENST00000340882 C22orf31O95567 290 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 ABHD15Q6UXT9 468 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 TMEM173Q86WV6 379 aaPredicted RBP18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 ECHDC2Q86YB7 292 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 MB21D2Q8IYB1 491 aaPredicted RBP18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 NCOA7Q8NI08 942 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 CYP26B1Q9NR63 512 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
NECTIN1-202ENST00000340882 OTOGLQ3ZCN5 2332 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 KRT37O76014 449 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 SART3Q15020 963 aaKnown RBP18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 ATAT1Q5SQI0 421 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 ODR4Q5SWX8 454 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 TMC5Q6UXY8 1006 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 FAM43BQ6ZT52 329 aaPredicted RBP18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 KIAA2013Q8IYS2 634 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 PLCD3Q8N3E9 789 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 RNF169Q8NCN4 708 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 SLC22A17Q8WUG5 538 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 R4GN57 208 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 KMT2BQ9UMN6 2715 aaPredicted RBP18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 COL1A2P08123 1366 aa18.66■□□□□ 0.58
NECTIN1-202ENST00000340882 BACH1O14867 736 aa18.65■□□□□ 0.58
NECTIN1-202ENST00000340882 NARSO43776 548 aaKnown RBP18.65■□□□□ 0.58
NECTIN1-202ENST00000340882 DDAH1O94760 285 aa18.65■□□□□ 0.58
NECTIN1-202ENST00000340882 IGHDP01880 384 aa18.65■□□□□ 0.58
NECTIN1-202ENST00000340882 SLC26A2P50443 739 aa18.65■□□□□ 0.58
NECTIN1-202ENST00000340882 NUCB1Q02818 461 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms