RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 CCNFP41002 786 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 BAG6P46379 1132 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 LSAMPQ13449 338 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 BYSLQ13895 437 aaKnown RBP18.33■□□□□ 0.52
CDK11B-201ENST00000340677 NLRP14Q86W24 1093 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 FAM84BQ96KN1 310 aaPredicted RBP18.33■□□□□ 0.52
CDK11B-201ENST00000340677 PSKH2Q96QS6 385 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 SLF1Q9BQI6 1058 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 ETNK2Q9NVF9 386 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.52
CDK11B-201ENST00000340677 COL11A2P13942 1736 aaPredicted RBP18.33■□□□□ 0.52
CDK11B-201ENST00000340677 TKTP29401 623 aaKnown RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 CHKAP35790 457 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 PIK3CAP42336 1068 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 GPC3P51654 580 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 BRSK1Q8TDC3 778 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 PRPF18Q99633 342 aaKnown RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 LIMCH1Q9UPQ0 1083 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 SNAP23O00161 211 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 ITGA2BP08514 1039 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 GJB2P29033 226 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 TUBB4BP68371 445 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 WDR93Q6P2C0 686 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 RBM43Q6ZSC3 357 aaKnown RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 C3orf62Q6ZUJ4 267 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 UQCC2Q9BRT2 126 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 SEMA4AQ9H3S1 761 aa18.32■□□□□ 0.52
CDK11B-201ENST00000340677 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
CDK11B-201ENST00000340677 TCRBV5S4A2TA0A5A2 114 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ASAP2O43150 1006 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ATP2C2O75185 946 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 APOEP02649 317 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 HSPD1P10809 573 aaKnown RBP18.31■□□□□ 0.52
CDK11B-201ENST00000340677 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
CDK11B-201ENST00000340677 PDE6AP16499 860 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 MZF1P28698 734 aaPredicted RBP18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ATRIPQ8WXE1 791 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 PTPRN2Q92932 1015 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
CDK11B-201ENST00000340677 VCXQ9H320 206 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ACADSBP45954 432 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 HPCAP84074 193 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 OLFML2BQ68BL8 750 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 CCDC129Q6ZRS4 1044 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 MAP7D3Q8IWC1 876 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 IFT81Q8WYA0 676 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ZNF75CPQ92670 426 aaPredicted RBP18.31■□□□□ 0.52
CDK11B-201ENST00000340677 CATSPER2Q96P56 530 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 ZMYM6O95789 1325 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 CACNA1SQ13698 1873 aa18.31■□□□□ 0.52
CDK11B-201ENST00000340677 A6NJR5 290 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 SPDYE16A6NNV3 312 aaPredicted RBP18.3■□□□□ 0.52
CDK11B-201ENST00000340677 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDK11B-201ENST00000340677 ASLP04424 464 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 GLI1P08151 1106 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 COL6A1P12109 1028 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 WASHC4Q2M389 1173 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 ANKDD1AQ495B1 522 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 PPP2R2DQ66LE6 453 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 CYP26C1Q6V0L0 522 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 PSTPIP2Q9H939 334 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 CTNNAL1Q9UBT7 734 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 USH1CQ9Y6N9 552 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 SNX2O60749 519 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 KRT9P35527 623 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 GBE1Q04446 702 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
CDK11B-201ENST00000340677 LURAP1LQ8IV03 231 aa18.3■□□□□ 0.52
CDK11B-201ENST00000340677 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
CDK11B-201ENST00000340677 TUT1Q9H6E5 874 aaKnown RBP18.3■□□□□ 0.52
CDK11B-201ENST00000340677 GOLGA8KD6RF30 607 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 SERPINB7O75635 380 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 FAM107AO95990 144 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 CHGBP05060 677 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 NPR1P16066 1061 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 ANXA13P27216 316 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 HIBADHP31937 336 aaKnown RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 TNIP1Q15025 636 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 TWF2Q6IBS0 349 aaKnown RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 EGLN2Q96KS0 407 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 DNAI2Q9GZS0 605 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 TTC7AQ9ULT0 858 aaPredicted RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 MTMR6Q9Y217 621 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 COL1A1P02452 1464 aaPredicted RBP18.29■□□□□ 0.52
CDK11B-201ENST00000340677 MAP3K7O43318 606 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 CYTH3O43739 400 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 MMP10P09238 476 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 PLCG2P16885 1265 aa18.29■□□□□ 0.52
CDK11B-201ENST00000340677 GYG1P46976 350 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms