RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 QARSP47897 775 aaKnown RBP16.4■□□□□ 0.22
ERCC1-203ENST00000340192 ANO5Q75V66 913 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 TMEM40Q8WWA1 233 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 OSMRQ99650 979 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 SH2D3AQ9BRG2 576 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 WRAP73Q9P2S5 460 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-203ENST00000340192 PCDHA12Q9UN75 941 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
ERCC1-203ENST00000340192 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 MCM7P33993 719 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 CRYBB1P53674 252 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 NLRP11P59045 1033 aaKnown RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 EPHA7Q15375 998 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 RTN4RL1Q86UN2 441 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 NOSTRINQ8IVI9 506 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 MTMR9Q96QG7 549 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 LXNQ9BS40 222 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 TMX1Q9H3N1 280 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 TTC12Q9H892 705 aaPredicted RBP16.39■□□□□ 0.21
ERCC1-203ENST00000340192 RGL1Q9NZL6 768 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 MTUS1Q9ULD2 1270 aa16.39■□□□□ 0.21
ERCC1-203ENST00000340192 RALGAPA2Q2PPJ7 1873 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
ERCC1-203ENST00000340192 TXKP42681 527 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 MCM2P49736 904 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 NFX1Q12986 1120 aaKnown RBP16.38■□□□□ 0.21
ERCC1-203ENST00000340192 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
ERCC1-203ENST00000340192 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 TSPYL2Q9H2G4 693 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-203ENST00000340192 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 ERVK-5Q9HDB9 667 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 ST3GAL5Q9UNP4 418 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
ERCC1-203ENST00000340192 IGKV6-21A0A0C4DH24 114 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 MAFO75444 373 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-203ENST00000340192 ERVK-21P61565 698 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 CYP4A11Q02928 519 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 DRP2Q13474 957 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 CTTNQ14247 550 aaKnown RBP16.37■□□□□ 0.21
ERCC1-203ENST00000340192 FAM228AQ86W67 206 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 PPM1EQ8WY54 764 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 ZNF668Q96K58 619 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-203ENST00000340192 CYP26B1Q9NR63 512 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
ERCC1-203ENST00000340192 GPR182O15218 404 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 MGEA5O60502 916 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
ERCC1-203ENST00000340192 YWHABP31946 246 aaKnown RBP16.36■□□□□ 0.21
ERCC1-203ENST00000340192 DNM2P50570 870 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 GPC3P51654 580 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 NPEPPSP55786 919 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 ZNF174Q15697 407 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 CCDC85BQ15834 202 aaPredicted RBP16.36■□□□□ 0.21
ERCC1-203ENST00000340192 ODR4Q5SWX8 454 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 TPH2Q8IWU9 490 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 CRIPAKQ8N1N5 446 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
ERCC1-203ENST00000340192 CEP170P1Q96L14 293 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 EIF2AK1Q9BQI3 630 aaKnown RBP16.36■□□□□ 0.21
ERCC1-203ENST00000340192 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
ERCC1-203ENST00000340192 DENND3A2RUS2 1198 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 ZBTB39O15060 712 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 LPXNO60711 386 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 SLITRK3O94933 977 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 EIF4BP23588 611 aaKnown RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 GJB2P29033 226 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 GRB10Q13322 594 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 TTC38Q5R3I4 469 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 FAM43BQ6ZT52 329 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 OTUD6AQ7L8S5 288 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 GDPD5Q8WTR4 605 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 ADAM2Q99965 735 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 HSD17B14Q9BPX1 270 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 RC3H2Q9HBD1 1191 aaKnown RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 SUCLA2Q9P2R7 463 aaPredicted RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 NOL7Q9UMY1 257 aaKnown RBP16.35■□□□□ 0.21
ERCC1-203ENST00000340192 GTF3C3Q9Y5Q9 886 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 MTCH2Q9Y6C9 303 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms