RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SYMPKQ92797 1274 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TRPC7Q9HCX4 862 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 UVRAGQ9P2Y5 699 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 NFIBO00712 420 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 STX7O15400 261 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 RABGAP1LQ5R372 815 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CENPPQ6IPU0 288 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 BLIDQ8IZY5 108 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CSTF3Q12996 717 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TNNI3KQ59H18 835 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 PPP4R3CPQ6ZMV5 832 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ATP8A2Q9NTI2 1148 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 FPGT-TNNI3KV9GXZ4 949 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ASAP2O43150 1006 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 NR2F2P24468 414 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 KRT28Q7Z3Y7 464 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 NLRX1Q86UT6 975 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TAB3Q8N5C8 712 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 LRRC39Q96DD0 335 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CMTM5Q96DZ9 223 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 KCNK16Q96T55 309 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 USE1Q9NZ43 259 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ADGRA3Q8IWK6 1321 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 JAK2O60674 1132 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TSPAN9O75954 239 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 MECOMQ03112 1051 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 HABP4Q5JVS0 413 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SZRD1Q7Z422 152 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 LRRC49Q8IUZ0 686 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 AHI1Q8N157 1196 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 THOC1Q96FV9 657 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 RBM41Q96IZ5 413 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 VIPAS39Q9H9C1 493 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 UGGT2Q9NYU1 1516 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 RALBP11234 206 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 GSPT1P15170 499 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MARK3P27448 753 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CDC37Q16543 378 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ME3Q16798 604 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CDC26Q8NHZ8 85 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 NLRP4Q96MN2 994 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 FTOQ9C0B1 505 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TSPOAP1O95153 1857 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ABCA5Q8WWZ7 1642 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SEMA3EO15041 775 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MYCLP12524 364 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SLC7A5Q01650 507 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KRT72Q14CN4 511 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CCDC149Q6ZUS6 474 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MAEAQ7L5Y9 396 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KCNJ14Q9UNX9 436 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MTMR6Q9Y217 621 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CFAP69A5D8W1 941 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SNUPNO95149 360 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KCNA1Q09470 495 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KRT73Q86Y46 540 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 BPIFA3Q9BQP9 254 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ZNF556Q9HAH1 456 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ITM2BQ9Y287 266 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TCP11X1B4DZS4 312 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 EIF3HO15372 352 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 DDAH1O94760 285 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TRIM25Q14258 630 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KLHL12Q53G59 568 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ZBED2Q9BTP6 218 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 VPS54Q9P1Q0 977 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 DCTN4Q9UJW0 460 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 HPS5Q9UPZ3 1129 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 PITPNM2Q9BZ72 1349 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 FKBP3Q00688 224 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 LRRC63Q05C16 580 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ASZ1Q8WWH4 475 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 BBS2Q9BXC9 721 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MRPL1Q9BYD6 325 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 ZNF518AQ6AHZ1 1483 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 PCP11498 1178 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 HIF1AQ16665 826 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 FAM26FQ5R3K3 315 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 RUBCNLQ9H714 662 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SUGT1Q9Y2Z0 365 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TRPM2O94759 1503 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 BLMP54132 1417 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 INSRP06213 1382 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 H7C0S8 307 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 DMPKQ09013 629 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 IMPG1Q17R60 797 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 WLSQ5T9L3 541 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 COPS6Q7L5N1 327 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 MAGEB5Q9BZ81 275 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 CARD9Q9H257 536 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 SELENONQ9NZV5 590 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 VIRMAQ69YN4 1812 aaKnown RBP6.57□□□□□ -1.36
CSMD1-201ENST00000335551 PPP6R2O75170 966 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 TSPY1Q01534 308 aa6.57□□□□□ -1.36
CSMD1-201ENST00000335551 KBTBD3Q8NAB2 608 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms