RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 COLGALT1Q8NBJ5 622 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 C17orf80Q9BSJ5 609 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 ZNF577Q9BSK1 485 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 TEKT3Q9BXF9 490 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 S1PR5Q9H228 398 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 AGO3Q9H9G7 860 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 RTEL1Q9NZ71 1219 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 MORC2Q9Y6X9 1032 aaPredicted RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 DARSP14868 501 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 TMOD1P28289 359 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 HOXD11P31277 338 aaPredicted RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 FAM187BQ17R55 369 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 CCDC60Q8IWA6 550 aaPredicted RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 DNAJB3Q8WWF6 145 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 MRPS27Q92552 414 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 YME1L1Q96TA2 773 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 ANKEF1Q9NU02 776 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 CD207Q9UJ71 328 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 VAV3Q9UKW4 847 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 SSX2IPQ9Y2D8 614 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 MRPL42Q9Y6G3 142 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 A0A0U1RQF3 1178 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 MSH4O15457 936 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 KLRC1P26715 233 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 GPC3P51654 580 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 SSRP1Q08945 709 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 EPHA7Q15375 998 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 UTP14CQ5TAP6 766 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 PPP4R3CPQ6ZMV5 832 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 CHST3Q7LGC8 479 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 FAM228AQ86W67 206 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 SLFN12Q8IYM2 578 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 GDPD5Q8WTR4 605 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 LLPHQ9BRT6 129 aaKnown RBP7.22□□□□□ -1.25
USP16-201ENST00000334352 MYL10Q9BUA6 226 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 DACT1Q9NYF0 836 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 TCEAL9Q9UHQ7 104 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 CYP46A1Q9Y6A2 500 aa7.22□□□□□ -1.25
USP16-201ENST00000334352 CPLX2Q6PUV4 134 aaKnown RBP7.21□□□□□ -1.25
USP16-201ENST00000334352 ECHDC2Q86YB7 292 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 TRIM22Q8IYM9 498 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 BLIDQ8IZY5 108 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 LRRC43Q8N309 656 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 SMRP1Q8NCR6 262 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 TCP11Q8WWU5 503 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 GLG1Q92896 1179 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 TSPAN18Q96SJ8 248 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 DHX33Q9H6R0 707 aaKnown RBP7.21□□□□□ -1.25
USP16-201ENST00000334352 C11orf16Q9NQ32 467 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 MAFFQ9ULX9 164 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 PCDHB7Q9Y5E2 793 aa7.21□□□□□ -1.25
USP16-201ENST00000334352 PDCD11Q14690 1871 aaKnown RBP7.21□□□□□ -1.26
USP16-201ENST00000334352 PSMC5P62195 406 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 TCEAL5Q5H9L2 206 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 TMEM31Q5JXX7 168 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.26
USP16-201ENST00000334352 MICU3Q86XE3 530 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 SLC39A11Q8N1S5 342 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 NOC2LQ9Y3T9 749 aaKnown RBP7.21□□□□□ -1.26
USP16-201ENST00000334352 TELO2Q9Y4R8 837 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 PCDHB12Q9Y5F1 795 aa7.21□□□□□ -1.26
USP16-201ENST00000334352 LILRB3O75022 631 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 RPS6KA5O75582 802 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 ITGB1P05556 798 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 IGFBP4P22692 258 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 CREMQ03060 361 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 COL9A3Q14050 684 aaPredicted RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 PDXDC2PQ6P474 469 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 PPFIBP1Q86W92 1011 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 SLC22A17Q8WUG5 538 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 HERC2P3Q9BVR0 1158 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 OSBPL7Q9BZF2 842 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 DISC1Q9NRI5 854 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 KANSL3Q9P2N6 904 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 DBR1Q9UK59 544 aaKnown RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 EIF4BP23588 611 aaKnown RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 CD52P31358 61 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 CTNNB1P35222 781 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 ITIH3Q06033 890 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 SPIRE1Q08AE8 756 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 NONOQ15233 471 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP16-201ENST00000334352 PTCRAQ6ISU1 281 aaPredicted RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 TRIM50Q86XT4 487 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 CASP10Q92851 521 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 JAKMIP1Q96N16 626 aaKnown RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 LRFN3Q9BTN0 628 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 UNC45AQ9H3U1 944 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 ATP6V0A4Q9HBG4 840 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 ST3GAL5Q9UNP4 418 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 USTQ9Y2C2 406 aa7.2□□□□□ -1.26
USP16-201ENST00000334352 MTCL1Q9Y4B5 1905 aaKnown RBP7.2□□□□□ -1.26
USP16-201ENST00000334352 ZNF862O60290 1169 aa7.19□□□□□ -1.26
USP16-201ENST00000334352 MGEA5O60502 916 aa7.19□□□□□ -1.26
USP16-201ENST00000334352 P4HBP07237 508 aaKnown RBP7.19□□□□□ -1.26
USP16-201ENST00000334352 GHRP10912 638 aa7.19□□□□□ -1.26
USP16-201ENST00000334352 XBP1P17861 261 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms