RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 SNX1Q13596 522 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 B4GALNT4Q76KP1 1039 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 CCDC17Q96LX7 622 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 CCT8L2Q96SF2 557 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 GANQ9H2C0 597 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 PARVGQ9HBI0 331 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TYW1Q9NV66 732 aaKnown RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 CCDC38Q502W7 563 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 GLE1Q53GS7 698 aaKnown RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 ZNF662Q6ZS27 426 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TPCN2Q8NHX9 752 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 FAM84AQ96KN4 292 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 INPP4AQ96PE3 977 aaPredicted RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 EDEM3Q9BZQ6 932 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 MLXIPLQ9NP71 852 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 FBXO28Q9NVF7 368 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TAS2R14Q9NYV8 317 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TMEM150BA6NC51 233 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 DDX3XO00571 662 aaKnown RBP eCLIP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 PPP1R37O75864 691 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 MMP10P09238 476 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 RPA1P27694 616 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 SMARCA1P28370 1054 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 USP11P51784 963 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 GABPAQ06546 454 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 CCDC105Q8IYK2 499 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 WHAMMQ8TF30 809 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 ZNF577Q9BSK1 485 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 NEUROG2Q9H2A3 272 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 RNF14Q9UBS8 474 aa12.82□□□□□ -0.36
EFCAB13-201ENST00000331493 PHF20L1A8MW92 1017 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 MYL7Q01449 175 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 RINT1Q6NUQ1 792 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 NLRP14Q86W24 1093 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 BTBD6Q96KE9 485 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 NAP1L4Q99733 375 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 PPP1R9AQ9ULJ8 1098 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 ABCB11O95342 1321 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 VPS72Q15906 364 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 MICALCLQ6ZW33 695 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 SYT2Q8N9I0 419 aaPredicted RBP12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 SLC35C1Q96A29 364 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 GGT7Q9UJ14 662 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 GAKO14976 1311 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 KCNJ1P48048 391 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 FRMD5Q7Z6J6 570 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 PALB2Q86YC2 1186 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 ARFGAP2Q8N6H7 521 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 AIPL1Q9NZN9 384 aa12.81□□□□□ -0.36
EFCAB13-201ENST00000331493 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 RAD17O75943 681 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 FERP16591 822 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 AOC3Q16853 763 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 C2CD6Q53TS8 623 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 ZNF473Q8WTR7 871 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 PBKQ96KB5 322 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 DAAM1Q9Y4D1 1078 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 XIRP1Q702N8 1843 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 CALCAP01258 141 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 KRT5P13647 590 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 RDXP35241 583 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 CETN1Q12798 172 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 EDRF1Q3B7T1 1238 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 CBWD6Q4V339 395 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 CBWD3Q5JTY5 395 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 CBWD5Q5RIA9 395 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 SLC20A1Q8WUM9 679 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 FMO2Q99518 471 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 PCDHGC5Q9Y5F6 944 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 FOXN3O00409 490 aaPredicted RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 PDXKO00764 312 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 EPC2Q52LR7 807 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 PPP1R18Q6NYC8 613 aa12.8□□□□□ -0.36
EFCAB13-201ENST00000331493 RUFY4Q6ZNE9 571 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms