RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 IGBP1P78318 339 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 CSTF1Q05048 431 aaKnown RBP17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 SEMA3FQ13275 785 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 BMS1Q14692 1282 aaKnown RBP17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 LETM2Q2VYF4 491 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 SLC22A17Q8WUG5 538 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 GLG1Q92896 1179 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 ZSCAN32Q9NX65 697 aa17.08■□□□□ 0.32
CTHRC1-201ENST00000330295 ZZEF1O43149 2961 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 FLNBO75369 2602 aaKnown RBP17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 N4BP1O75113 896 aaKnown RBP17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 TCF7P36402 384 aaPredicted RBP17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 SPEM2Q0P670 501 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 DCLRE1AQ6PJP8 1040 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 INPP4AQ96PE3 977 aaPredicted RBP17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 ZMIZ1Q9ULJ6 1067 aa17.07■□□□□ 0.32
CTHRC1-201ENST00000330295 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 FIBPO43427 364 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 SIRT2Q8IXJ6 389 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 LRRC43Q8N309 656 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 JMJD4Q9H9V9 463 aa17.06■□□□□ 0.32
CTHRC1-201ENST00000330295 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 STAM2O75886 525 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 N4BP2L1Q5TBK1 243 aaPredicted RBP17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 NELL1Q92832 810 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 NXPE3Q969Y0 559 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 CASD1Q96PB1 797 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
CTHRC1-201ENST00000330295 RPS6KA5O75582 802 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 STARD6P59095 220 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 FAM189BP81408 668 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 KRT76Q01546 638 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 ZMYM1Q5SVZ6 1142 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 C15orf39Q6ZRI6 1047 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 AUTS2Q8WXX7 1259 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 SENP7Q9BQF6 1050 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 ZBP1Q9H171 429 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 EPS15L1Q9UBC2 864 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 NOC2LQ9Y3T9 749 aaKnown RBP17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
CTHRC1-201ENST00000330295 DOCK8Q8NF50 2099 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 IGF2RP11717 2491 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 HOXA2O43364 376 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 INSRRP14616 1297 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 AAMPQ13685 434 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 GIT2Q14161 759 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 VPS52Q8N1B4 723 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 SHDQ96IW2 340 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 LRRCC1Q9C099 1032 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 SLC2A4RGQ9NR83 387 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 ST3GAL5Q9UNP4 418 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 PCDHA2Q9Y5H9 948 aa17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 GCN1Q92616 2671 aaKnown RBP17.03■□□□□ 0.32
CTHRC1-201ENST00000330295 GCOM1H8Y6P7 765 aaPredicted RBP17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 SMARCA5O60264 1052 aaPredicted RBP17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 LRP3O75074 770 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 POLR2MP0CAP2 368 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 ABI1Q8IZP0 508 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 NME8Q8N427 588 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 GINS2Q9Y248 185 aa17.02■□□□□ 0.32
CTHRC1-201ENST00000330295 FRMPD4Q14CM0 1322 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 KANSL1LA0AUZ9 987 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 GIMAP8Q8ND71 665 aaPredicted RBP17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 STAMQ92783 540 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 SMARCAD1Q9H4L7 1026 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 RAB23Q9ULC3 237 aa17.01■□□□□ 0.31
CTHRC1-201ENST00000330295 LAMA4Q16363 1823 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 SMIM35A0A1B0GVV1 85 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 GSTTP1A0A1W2PQM5 241 aa17■□□□□ 0.31
CTHRC1-201ENST00000330295 C1QTNF9BB2RNN3 333 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms