RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 ETNPPLQ8TBG4 499 aa15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 PABPC5Q96DU9 382 aaKnown RBP15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 SLKQ9H2G2 1235 aaPredicted RBP15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 UNC45AQ9H3U1 944 aa15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 ELAC1Q9H777 363 aaKnown RBP15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 CDHR5Q9HBB8 845 aa15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 ST3GAL5Q9UNP4 418 aa15.32■□□□□ 0.04
GTF3C6-201ENST00000329970 C9IYK1 514 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 MGEA5O60502 916 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 TDP2O95551 362 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 XBP1P17861 261 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 PRKCEQ02156 737 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 STK3Q13188 491 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 TARBP2Q15633 366 aaKnown RBP15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 EFCAB12Q6NXP0 572 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 FAM228AQ86W67 206 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 AIFM3Q96NN9 605 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 OSMRQ99650 979 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 NIFKQ9BYG3 293 aaKnown RBP15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 ARID2Q68CP9 1835 aa15.31■□□□□ 0.04
GTF3C6-201ENST00000329970 GRM6O15303 877 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 VTNP04004 478 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 GCFC2P16383 781 aaKnown RBP15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 FAM189BP81408 668 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 DSC3Q14574 896 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 UGCGQ16739 394 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 TCEAL5Q5H9L2 206 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 PPP4R3AQ6IN85 833 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 MIER3Q7Z3K6 550 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 NECAB3Q96P71 396 aaPredicted RBP15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 CEP89Q96ST8 783 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 ADAM2Q99965 735 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 LRFN2Q9ULH4 789 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 GINS2Q9Y248 185 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 PCDHB7Q9Y5E2 793 aa15.3■□□□□ 0.04
GTF3C6-201ENST00000329970 IGKV6-21A0A0C4DH24 114 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 DENND3A2RUS2 1198 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 TBX3O15119 743 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 STBD1O95210 358 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 KCNA5P22460 613 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 EIF4BP23588 611 aaKnown RBP15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 CLCN3P51790 818 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 CTC1Q2NKJ3 1217 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 XKR3Q5GH77 459 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 NEK8Q86SG6 692 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 WASF1Q92558 559 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 TMEM161AQ9NX61 479 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 AKT3Q9Y243 479 aa15.29■□□□□ 0.04
GTF3C6-201ENST00000329970 GRXCR2A6NFK2 248 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 CHMP2AO43633 222 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 CTDNEP1O95476 244 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 GPC3P51654 580 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 AK2P54819 239 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 NLRP11P59045 1033 aaKnown RBP15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 UBE3AQ05086 875 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 TBC1D8BQ0IIM8 1120 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 CAMK1Q14012 370 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 INF2Q27J81 1249 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 KCNJ14Q9UNX9 436 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 PPME1Q9Y570 386 aa15.28■□□□□ 0.04
GTF3C6-201ENST00000329970 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 HOXA2O43364 376 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 SLC37A4O43826 429 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 DKC1O60832 514 aaKnown RBP eCLIP15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 ITGB1P05556 798 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 PSMC5P62195 406 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 CSPP1Q1MSJ5 1256 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 TRMT1LQ7Z2T5 733 aaKnown RBP15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 LRRC71Q8N4P6 559 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 RSPH1Q8WYR4 309 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 GJA10Q969M2 543 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 PPP2R3CQ969Q6 453 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 FAM50BQ9Y247 325 aa15.27■□□□□ 0.04
GTF3C6-201ENST00000329970 DARSP14868 501 aaKnown RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 ZSCAN20P17040 1043 aaPredicted RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 HYAL1Q12794 435 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 PAN2Q504Q3 1202 aaKnown RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 PTCRAQ6ISU1 281 aaPredicted RBP15.26■□□□□ 0.03
GTF3C6-201ENST00000329970 KLHL23Q8NBE8 558 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms