RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 WDR78Q5VTH9 848 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 BRI3BPQ8WY22 251 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 ERGIC2Q96RQ1 377 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 PORCNQ9H237 461 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 IKZF4Q9H2S9 585 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 MROH8Q9H579 483 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 DNAI1Q9UI46 699 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 TTC26A0AVF1 554 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 TGFB1I1O43294 461 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CALUO43852 315 aaPredicted RBP22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 GNA14O95837 355 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 FKBP15Q5T1M5 1219 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCDC60Q8IWA6 550 aaPredicted RBP22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 ATP6V0A1Q93050 837 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 FANCGO15287 622 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 MARSP56192 900 aaKnown RBP22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 EEPD1Q7L9B9 569 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 LRRN4CLQ8ND94 238 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 SMCR8Q8TEV9 937 aaPredicted RBP22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCDC51Q96ER9 411 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 EFCC1Q9HA90 598 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 FAM53CQ9NYF3 392 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 PPP2R2CQ9Y2T4 447 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 SOCS7O14512 581 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 KRT9P35527 623 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 MIS18BP1Q6P0N0 1132 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 STRA6Q9BX79 667 aa22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 LARSQ9P2J5 1176 aaKnown RBP22.3■■□□□ 1.16
RIPPLY3-201ENST00000329553 ZNFX1Q9P2E3 1918 aaKnown RBP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 SUPT20HL2P0C7V6 817 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 H2AFXP16104 143 aaPredicted RBP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 ERCC6LQ2NKX8 1250 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 SHCBP1Q8NEM2 672 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 ABHD10Q9NUJ1 306 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 SLC45A1Q9Y2W3 748 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 PCDHB13Q9Y5F0 798 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 ZMYM2Q9UBW7 1377 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 CLIC2O15247 247 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 DKC1O60832 514 aaKnown RBP eCLIP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 ATG7O95352 703 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 NR3C1P04150 777 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 UBA1P22314 1058 aaKnown RBP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 SPRYD7Q5W111 196 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 CST9Q5W186 159 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 OTUD6AQ7L8S5 288 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 TRIM59Q8IWR1 403 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 GPRC5AQ8NFJ5 357 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 ZNF526Q8TF50 670 aaPredicted RBP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 GTF3C2Q8WUA4 911 aaPredicted RBP22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 PKNOX2Q96KN3 472 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 GPRC5CQ9NQ84 441 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 CAPN11Q9UMQ6 739 aa22.29■■□□□ 1.16
RIPPLY3-201ENST00000329553 SYNGAP1Q96PV0 1343 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 PPP1R37O75864 691 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 PLS3P13797 630 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 FECHP22830 423 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 ANKRD13CQ8N6S4 541 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 CEP170P1Q96L14 293 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 PCMTD1Q96MG8 357 aaPredicted RBP22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 NUP58Q9BVL2 599 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 TIPINQ9BVW5 301 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 NAA15Q9BXJ9 866 aaKnown RBP22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 TTYH3Q9C0H2 523 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 SIK3Q9Y2K2 1263 aa22.28■■□□□ 1.16
RIPPLY3-201ENST00000329553 SOWAHDA6NJG2 315 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 STXBP4Q6ZWJ1 553 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 ANKRD23Q86SG2 305 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCDC155Q8N6L0 562 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 LUC7L2Q9Y383 392 aaKnown RBP22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 UBE4BO95155 1302 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 GOLGA6L9A6NEM1 432 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 TRIM21P19474 475 aaKnown RBP22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 MTF1Q14872 753 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 RETREG2Q8NC44 543 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 AGPAT5Q9NUQ2 364 aa22.27■■□□□ 1.16
RIPPLY3-201ENST00000329553 AKAP3O75969 853 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 FARP2O94887 1054 aaPredicted RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 TGFB3P10600 412 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 MAPTP10636 758 aaKnown RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 RPL13P26373 211 aaKnown RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 PRKCEQ02156 737 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 FAM102BQ5T8I3 360 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 DRC1Q96MC2 740 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 MYH9P35579 1960 aaKnown RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 K7ENM7 598 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 ATP4AP20648 1035 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 CASP4P49662 377 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 LY6KQ17RY6 165 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 RAD9BQ6WBX8 426 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 TOGARAM2Q6ZUX3 1019 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 FRMD5Q7Z6J6 570 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 OR8K1Q8NGG5 319 aa22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 MPHOSPH6Q99547 160 aaKnown RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 MAFBQ9Y5Q3 323 aaPredicted RBP22.26■■□□□ 1.15
RIPPLY3-201ENST00000329553 IGSF9BQ9UPX0 1349 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 LRRC37A2A6NM11 1700 aa22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 ITGBL1O95965 494 aaPredicted RBP22.25■■□□□ 1.15
RIPPLY3-201ENST00000329553 NEDD9Q14511 834 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms