RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
CCDC65-202ENST00000320516 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 ADAMTS10Q9H324 1103 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 SUGCTQ9HAC7 445 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 WRAP73Q9P2S5 460 aaPredicted RBP11.16□□□□□ -0.62
CCDC65-202ENST00000320516 GINS2Q9Y248 185 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 MTCH2Q9Y6C9 303 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 VCANP13611 3396 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 REV3LO60673 3130 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 QARSP47897 775 aaKnown RBP11.16□□□□□ -0.62
CCDC65-202ENST00000320516 TBC1D8BQ0IIM8 1120 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 GRB10Q13322 594 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 DRP2Q13474 957 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 EPHA7Q15375 998 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 FAM228AQ86W67 206 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 SLFN12Q8IYM2 578 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 ZNF689Q96CS4 500 aaPredicted RBP11.16□□□□□ -0.62
CCDC65-202ENST00000320516 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 PPP1R16BQ96T49 567 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 OSMRQ99650 979 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 C17orf80Q9BSJ5 609 aa11.16□□□□□ -0.62
CCDC65-202ENST00000320516 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
CCDC65-202ENST00000320516 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 MGEA5O60502 916 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 TMOD1P28289 359 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 NLRP11P59045 1033 aaKnown RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 MTERF2Q49AM1 385 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 MAP7D2Q96T17 732 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 SH2D3AQ9BRG2 576 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
CCDC65-202ENST00000320516 PRDM6Q9NQX0 595 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 ST3GAL5Q9UNP4 418 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 AKT3Q9Y243 479 aa11.15□□□□□ -0.62
CCDC65-202ENST00000320516 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 GPR182O15218 404 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 ST18O60284 1047 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 MAFO75444 373 aaPredicted RBP11.14□□□□□ -0.63
CCDC65-202ENST00000320516 DGKIO75912 1065 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
CCDC65-202ENST00000320516 GPC3P51654 580 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
CCDC65-202ENST00000320516 CALCRLQ16602 461 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 PLA2G4FQ68DD2 849 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 C4orf19Q8IY42 314 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 PPM1EQ8WY54 764 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 LXNQ9BS40 222 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
CCDC65-202ENST00000320516 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 PCDHA12Q9UN75 941 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
CCDC65-202ENST00000320516 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 MARCH6O60337 910 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 NEMFO60524 1076 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 DKC1O60832 514 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 EIF4BP23588 611 aaKnown RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 DSC3Q14574 896 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 CCDC85BQ15834 202 aaPredicted RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 EPC2Q52LR7 807 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 ODR4Q5SWX8 454 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 NCAPH2Q6IBW4 605 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 NPAS4Q8IUM7 802 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 DYDC2Q96IM9 177 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 TMX3Q96JJ7 454 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 SAMD11Q96NU1 681 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 HSD17B14Q9BPX1 270 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 TTC12Q9H892 705 aaPredicted RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 CYP26B1Q9NR63 512 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 RGS18Q9NS28 235 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 XIRP2A4UGR9 3374 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 C9IYK1 514 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 SLITRK3O94933 977 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 DARSP14868 501 aaKnown RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 NPEPPSP55786 919 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 TMEM192Q8IY95 271 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 ADAM2Q99965 735 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 DHX33Q9H6R0 707 aaKnown RBP11.13□□□□□ -0.63
CCDC65-202ENST00000320516 ZSWIM4Q9H7M6 989 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 PPME1Q9Y570 386 aa11.13□□□□□ -0.63
CCDC65-202ENST00000320516 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
CCDC65-202ENST00000320516 ZBTB39O15060 712 aa11.12□□□□□ -0.63
CCDC65-202ENST00000320516 LYPLA2O95372 231 aa11.12□□□□□ -0.63
CCDC65-202ENST00000320516 U2AF2P26368 475 aaKnown RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms