RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SLC8A3P57103 927 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 PKN1Q16512 942 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 TMEM270Q6UE05 265 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 SDCCAG8Q86SQ7 713 aaPredicted RBP17.78■□□□□ 0.44
CLIP4-201ENST00000320081 NME8Q8N427 588 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 RSRC1Q96IZ7 334 aaKnown RBP17.78■□□□□ 0.44
CLIP4-201ENST00000320081 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 RASGRF2O14827 1237 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 CTIFO43310 598 aaKnown RBP17.78■□□□□ 0.44
CLIP4-201ENST00000320081 NUGGCQ68CJ6 796 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 NEK9Q8TD19 979 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
CLIP4-201ENST00000320081 SWSAP1Q6NVH7 229 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 PODNQ7Z5L7 613 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 ANAPC5Q9UJX4 755 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 TNNC2P02585 160 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 KRT1P04264 644 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 ASNSP08243 561 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 SRGNP10124 158 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 TRIM51Q9BSJ1 452 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 G3BP2Q9UN86 482 aaKnown RBP17.78■□□□□ 0.44
CLIP4-201ENST00000320081 TECPR2O15040 1411 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 CARSP49589 748 aaKnown RBP17.77■□□□□ 0.44
CLIP4-201ENST00000320081 RCAN1P53805 252 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 DCAF15Q66K64 600 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 ZNF449Q6P9G9 518 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 WRNIP1Q96S55 665 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 FAM49AQ9H0Q0 323 aaPredicted RBP17.77■□□□□ 0.44
CLIP4-201ENST00000320081 PLCB1Q9NQ66 1216 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 SNX12Q9UMY4 172 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 PIK3R2O00459 728 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 NDC80O14777 642 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 RCN2Q14257 317 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 SEC23AQ15436 765 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 PDXDC1Q6P996 788 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 JPH2Q9BR39 696 aaPredicted RBP17.77■□□□□ 0.44
CLIP4-201ENST00000320081 SPZ1Q9BXG8 430 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.44
CLIP4-201ENST00000320081 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 PARP2Q9UGN5 583 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 PCSK1NQ9UHG2 260 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 CAPN6Q9Y6Q1 641 aa17.77■□□□□ 0.44
CLIP4-201ENST00000320081 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.43
CLIP4-201ENST00000320081 TBC1D1Q86TI0 1168 aaPredicted RBP17.77■□□□□ 0.43
CLIP4-201ENST00000320081 GIMAP8Q8ND71 665 aaPredicted RBP17.77■□□□□ 0.43
CLIP4-201ENST00000320081 MTA3Q9BTC8 594 aa17.77■□□□□ 0.43
CLIP4-201ENST00000320081 ZMYND12Q9H0C1 365 aa17.77■□□□□ 0.43
CLIP4-201ENST00000320081 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.43
CLIP4-201ENST00000320081 MAD2L2Q9UI95 211 aa17.77■□□□□ 0.43
CLIP4-201ENST00000320081 NPEPPSP55786 919 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 SNRNP48Q6IEG0 339 aaKnown RBP17.76■□□□□ 0.43
CLIP4-201ENST00000320081 EMBQ6PCB8 327 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 RFX6Q8HWS3 928 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 CDAN1Q8IWY9 1227 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 KIFC3Q9BVG8 833 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.76■□□□□ 0.43
CLIP4-201ENST00000320081 CAPN9O14815 690 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 CYP26A1O43174 497 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 FGFR2P21802 821 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 KCNJ1P48048 391 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 GRIK5Q16478 980 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 LDHDQ86WU2 507 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 SMYD2Q9NRG4 433 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 CNGA1P29973 690 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 PEX19P40855 299 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 SRRM1Q8IYB3 904 aaKnown RBP17.76■□□□□ 0.43
CLIP4-201ENST00000320081 FAM114A2Q9NRY5 505 aa17.76■□□□□ 0.43
CLIP4-201ENST00000320081 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 hCG_1984214I3L0E3 225 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 SART1O43290 800 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 HIP1RO75146 1068 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 BMP6P22004 513 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 PPP6R3Q5H9R7 873 aaPredicted RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 PLA2G4FQ68DD2 849 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 DNAJC24Q6P3W2 148 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 CDR2LQ86X02 465 aaPredicted RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF713Q8N859 430 aaPredicted RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 MSTO1Q9BUK6 570 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 AGXT2Q9BYV1 514 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 FBXL5Q9UKA1 691 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 NOC2LQ9Y3T9 749 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 TTI1O43156 1089 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 BAG2O95816 211 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 PRELPP51888 382 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 KCNB1Q14721 858 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 TMEM206Q9H813 350 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 ADAM22Q9P0K1 906 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 FNDC3AQ9Y2H6 1198 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 UCHL3P15374 230 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 ECE1P42892 770 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 AS3MTQ9HBK9 375 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 DMGDHQ9UI17 866 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 A0A1W2PQC6 194 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms