RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CTCFP49711 727 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SLC30A9Q6PML9 568 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF34Q8IZ26 560 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 RAB3IL1Q8TBN0 382 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 MIPOL1Q8TD10 442 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PARD3BQ8TEW8 1205 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 JDP2Q8WYK2 163 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SH3GL3Q99963 347 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 TLR10Q9BXR5 811 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 FHDC1Q9C0D6 1143 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PCIF1Q9H4Z3 704 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CNOT10Q9H9A5 744 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 TTC7AQ9ULT0 858 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 ATF7P17544 494 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SLC9A1P19634 815 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CA4P22748 312 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 ATP5DP30049 168 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 ERVK-9P63128 1117 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 UBXN2AP68543 259 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 COG7P83436 770 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SMAD1Q15797 465 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 LRRC23Q53EV4 343 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 MDH1BQ5I0G3 518 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC174Q6PII3 467 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CEP128Q6ZU80 1094 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CTAGE3PQ8IX95 158 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 TGS1Q96RS0 853 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SCOCQ9UIL1 159 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 TDP2O95551 362 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 NTSR2O95665 410 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 IRX1P78414 480 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PRKG1Q13976 671 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CRYMQ14894 314 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 CLEC4GQ6UXB4 293 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 NLGN2Q8NFZ4 835 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 C1orf54Q8WWF1 131 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 HAUS1Q96CS2 278 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 BICD1Q96G01 975 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 EYA3Q99504 573 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 METTL5Q9NRN9 209 aaKnown RBP8.13□□□□□ -1.11
CDHR3-201ENST00000317716 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
CDHR3-201ENST00000317716 PDS5AQ29RF7 1337 aaKnown RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 CCNHP51946 323 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 SNAP25P60880 206 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 KCNJ2P63252 427 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 IRX4P78413 519 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 KIF22Q14807 665 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TMEM154Q6P9G4 183 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 KIAA0825Q8IV33 1275 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PBKQ96KB5 322 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TTC1Q99614 292 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PHF20Q9BVI0 1012 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 ABCF3Q9NUQ8 709 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 CIB2O75838 187 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 FSBPO95073 299 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 UBTFL6P0CB48 400 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 GNAT1P11488 350 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PRDX5P30044 214 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TRAPPC10P48553 1259 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 IFI35P80217 286 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TMED1Q13445 227 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PPP4R3AQ6IN85 833 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 ARMC9Q7Z3E5 817 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 SPICE1Q8N0Z3 855 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 ERP27Q96DN0 273 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 MXD3Q9BW11 206 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 DDX25Q9UHL0 483 aaKnown RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 GGA1Q9UJY5 639 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 DNM3Q9UQ16 869 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 DOT1LQ8TEK3 1739 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 MYMKA6NI61 221 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 GOLGA8SH3BPF8 625 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 GOLGA8MH3BSY2 632 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 GOLGA8RI6L899 631 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 DDAH1O94760 285 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 TARSP26639 723 aaKnown RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 KLRK1P26718 216 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 PREPLQ4J6C6 727 aaPredicted RBP8.12□□□□□ -1.11
CDHR3-201ENST00000317716 KLHDC7AQ5VTJ3 777 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 METTL13Q8N6R0 699 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 AGAP11Q8TF27 550 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 C9orf72Q96LT7 481 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms