RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 OLFML3Q9NRN5 406 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 ADAMTS1Q9UHI8 967 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 STK24Q9Y6E0 443 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 SLC26A4O43511 780 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 AFPP02771 609 aaKnown RBP13.61□□□□□ -0.23
RNF4-201ENST00000314289 VAV2P52735 878 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 MAPK7Q13164 816 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 SRGAP1Q7Z6B7 1085 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 NOA1Q8NC60 698 aaKnown RBP13.61□□□□□ -0.23
RNF4-201ENST00000314289 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 CEP72Q9P209 647 aa13.61□□□□□ -0.23
RNF4-201ENST00000314289 RBBP6Q7Z6E9 1792 aaKnown RBP13.61□□□□□ -0.23
RNF4-201ENST00000314289 H3BQF6 201 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 BACH1O14867 736 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 HNRNPH3P31942 346 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 CXCR5P32302 372 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 MAGEA1P43355 309 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 PTPROQ16827 1216 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 LONRF2Q1L5Z9 754 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 RSRC2Q7L4I2 434 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 ADM5C9JUS6 153 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 ATP8B1O43520 1251 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 LRRN2O75325 713 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 GAP43P17677 238 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 YWHABP31946 246 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 QARSP47897 775 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 RARRES1P49788 294 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 FSTL1Q12841 308 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 C10orf67Q8IYJ2 551 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 PACSIN1Q9BY11 444 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 UBXN6Q9BZV1 441 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 ZNF214Q9UL59 606 aaPredicted RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 COL11A1P12107 1806 aaPredicted RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 NCK2O43639 380 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 NR3C2P08235 984 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 RPL13P26373 211 aaKnown RBP13.6□□□□□ -0.23
RNF4-201ENST00000314289 PON1P27169 355 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 AMPD2Q01433 879 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 MOB2Q70IA6 237 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 SPAG5Q96R06 1193 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 GANQ9H2C0 597 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 SMARCAL1Q9NZC9 954 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 GCNT4Q9P109 453 aa13.6□□□□□ -0.23
RNF4-201ENST00000314289 A0A087X0T9 212 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 FAM228BP0C875 321 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 UCHL3P15374 230 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 MRPS25P82663 173 aaKnown RBP13.59□□□□□ -0.23
RNF4-201ENST00000314289 SLC9C1Q4G0N8 1177 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 TREML2Q5T2D2 321 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 APOBEC3FQ8IUX4 373 aaKnown RBP13.59□□□□□ -0.23
RNF4-201ENST00000314289 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
RNF4-201ENST00000314289 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 MMS19Q96T76 1030 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 AGPAT3Q9NRZ7 376 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 LCMT1Q9UIC8 334 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 LTBP3Q9NS15 1303 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 TRIM66O15016 1216 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 SLC16A4O15374 487 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 BCRP11274 1271 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 TNNT3P45378 269 aaPredicted RBP13.59□□□□□ -0.23
RNF4-201ENST00000314289 PEX3P56589 373 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 KLHL30Q0D2K2 578 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 BMT2Q1RMZ1 405 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 XKR9Q5GH70 373 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 GBP3Q9H0R5 595 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 VPS18Q9P253 973 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 ZNF112Q9UJU3 913 aa13.59□□□□□ -0.23
RNF4-201ENST00000314289 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 RGS20O76081 388 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 DSG3P32926 999 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 CDK17Q00537 523 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 FOXR2Q6PJQ5 311 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.23
RNF4-201ENST00000314289 PNKPQ96T60 521 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 A1CFQ9NQ94 594 aaKnown RBP13.58□□□□□ -0.23
RNF4-201ENST00000314289 EHD2Q9NZN4 543 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 MYO1AQ9UBC5 1043 aa13.58□□□□□ -0.23
RNF4-201ENST00000314289 EXOC3O60645 756 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 ZNF131P52739 623 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 DLG4P78352 724 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 VGLL4Q14135 290 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 CBWD6Q4V339 395 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 CBWD3Q5JTY5 395 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 CBWD5Q5RIA9 395 aa13.58□□□□□ -0.24
RNF4-201ENST00000314289 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms