RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PSMC5P62195 406 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 PAK2Q13177 524 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 DSC3Q14574 896 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 NAP1L4Q99733 375 aaKnown RBP16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 NRBP2Q9NSY0 501 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 RGL1Q9NZL6 768 aa16.41■□□□□ 0.22
PPP1CA-201ENST00000312989 M0QZ92 97 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 DGKIO75912 1065 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 IGFBP4P22692 258 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 GPC3P51654 580 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 EPHA7Q15375 998 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 MTERF2Q49AM1 385 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 SEPT9Q9UHD8 586 aaPredicted RBP16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 ST3GAL5Q9UNP4 418 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 GINS2Q9Y248 185 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 ADGRA3Q8IWK6 1321 aa16.4■□□□□ 0.22
PPP1CA-201ENST00000312989 C9IYK1 514 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 MAFO75444 373 aaPredicted RBP16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 RPS6KA5O75582 802 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 QARSP47897 775 aaKnown RBP16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 NPEPPSP55786 919 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 NLRP11P59045 1033 aaKnown RBP16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 HMGN5P82970 282 aaKnown RBP16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 C4orf19Q8IY42 314 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 SLFN12Q8IYM2 578 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 ZNF668Q96K58 619 aaPredicted RBP16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 YME1L1Q96TA2 773 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 LXNQ9BS40 222 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 WDR81Q562E7 1941 aa16.39■□□□□ 0.21
PPP1CA-201ENST00000312989 ZBTB39O15060 712 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 NEMFO60524 1076 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 SLITRK3O94933 977 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 GATMP50440 423 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 TBC1D8BQ0IIM8 1120 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 CCDC85BQ15834 202 aaPredicted RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 DYDC2Q96IM9 177 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 TMX3Q96JJ7 454 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 FOXP1Q9H334 677 aaPredicted RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 DHX33Q9H6R0 707 aaKnown RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 CYP26B1Q9NR63 512 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 TTC3P53804 2025 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 C5orf67F2Z3F1 127 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 LYPLA2O95372 231 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 DARSP14868 501 aaKnown RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 FAM189BP81408 668 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 NFX1Q12986 1120 aaKnown RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 TRIM29Q14134 588 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 CALCRLQ16602 461 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 NCAPH2Q6IBW4 605 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 FAM43BQ6ZT52 329 aaPredicted RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 PPM1EQ8WY54 764 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 RNF19AQ9NV58 838 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 AKT3Q9Y243 479 aa16.38■□□□□ 0.21
PPP1CA-201ENST00000312989 DDX11L8A8MPP1 907 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 EIF4BP23588 611 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 TOB1P50616 345 aaPredicted RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 CYP4A11Q02928 519 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 CTTNQ14247 550 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 NOSTRINQ8IVI9 506 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 MAP7D2Q96T17 732 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 ADAM2Q99965 735 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 EIF2AK1Q9BQI3 630 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 COL25A1Q9BXS0 654 aaPredicted RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 XPNPEP1Q9NQW7 623 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 MRPL42Q9Y6G3 142 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
PPP1CA-201ENST00000312989 POTEMA6NI47 508 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 H3BNC9 293 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 GPR182O15218 404 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 FGFR4P22455 802 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 TMOD1P28289 359 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 YWHABP31946 246 aaKnown RBP16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 NBR1Q14596 966 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 CMTR2Q8IYT2 770 aaKnown RBP16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 SAMD11Q96NU1 681 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 PCDHA12Q9UN75 941 aa16.36■□□□□ 0.21
PPP1CA-201ENST00000312989 A0A087WZ62 844 aa16.35■□□□□ 0.21
PPP1CA-201ENST00000312989 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms