RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C1orf186Q6ZWK4 172 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 HIP1RO75146 1068 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 FLOT1O75955 427 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 GAP43P17677 238 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 RASA3Q14644 834 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 RNF10Q8N5U6 811 aaKnown RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 SYN2Q92777 582 aaPredicted RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 TUFT1Q9NNX1 390 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 AIPL1Q9NZN9 384 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 CNTNAP1P78357 1384 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 CEP104O60308 925 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 ITGB5P18084 799 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 GUCY2DQ02846 1103 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 PPARDQ03181 441 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 EPHA7Q15375 998 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 FOXR2Q6PJQ5 311 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 KCNH7Q9NS40 1196 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 COL20A1Q9P218 1284 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 WNT10BO00744 389 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 ASNSP08243 561 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 RPS6KA1Q15418 735 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
PTPN2-201ENST00000309660 SLC5A5Q92911 643 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 NAGPAQ9UK23 515 aa12.61□□□□□ -0.39
PTPN2-201ENST00000309660 GRID2IPA4D2P6 1211 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 GOLGA6BA6NDN3 693 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 CXCL9Q07325 125 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 PADI6Q6TGC4 694 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 RUFY1Q96T51 708 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 RABEP2Q9H5N1 569 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 EPB41L5Q9HCM4 733 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 STIM2Q9P246 746 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
PTPN2-201ENST00000309660 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
PTPN2-201ENST00000309660 EGFRP00533 1210 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 STAT1P42224 750 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 PPP2R5CQ13362 524 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 TNIP1Q15025 636 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 ZNF720Q7Z2F6 126 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 FAM160B2Q86V87 743 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 AP1M1Q9BXS5 423 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 FEM1BQ9UK73 627 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 FZD1Q9UP38 647 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 GREB1LQ9C091 1923 aaPredicted RBP12.6□□□□□ -0.39
PTPN2-201ENST00000309660 PRPF4BQ13523 1007 aaKnown RBP12.6□□□□□ -0.39
PTPN2-201ENST00000309660 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 MMGT1Q8N4V1 131 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 NFU1Q9UMS0 254 aa12.6□□□□□ -0.39
PTPN2-201ENST00000309660 RBAK-RBAKDNI3L0D1 243 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 SLC26A4O43511 780 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 EVI5O60447 810 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN2-201ENST00000309660 DRAP1Q14919 205 aaPredicted RBP12.59□□□□□ -0.39
PTPN2-201ENST00000309660 ZSCAN26Q16670 478 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 EXOC4Q96A65 974 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 MXRA8Q9BRK3 442 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 GPRC5CQ9NQ84 441 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 GLI1P08151 1106 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 H2AFZP0C0S5 128 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 FMO5P49326 533 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 H2AFVQ71UI9 128 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
PTPN2-201ENST00000309660 PRLRP16471 622 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 CARSP49589 748 aaKnown RBP12.58□□□□□ -0.39
PTPN2-201ENST00000309660 MUM1L1Q5H9M0 696 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 NAA35Q5VZE5 725 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 PEX26Q7Z412 305 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 ADAT2Q7Z6V5 191 aaKnown RBP12.58□□□□□ -0.39
PTPN2-201ENST00000309660 GMLQ99445 158 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 MED4Q9NPJ6 270 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.39
PTPN2-201ENST00000309660 CLSTN1O94985 981 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms