RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 CLGNO14967 610 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 SKAP2O75563 359 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 ZKSCAN8Q15776 578 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 KNOP1Q1ED39 458 aaKnown RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L6PQ6QN14 398 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 TRPM8Q7Z2W7 1104 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 LRP5O75197 1615 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 C5orf60A6NFR6 353 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 SFI1A8K8P3 1242 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DDX3XO00571 662 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■□□□□ 8.9
PTPN7-201ENST00000309017 C21orf2O43822 256 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 EVI5O60447 810 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 LRRN2O75325 713 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DNAJC8O75937 253 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 CASP4P49662 377 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 EDRF1Q3B7T1 1238 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 PRR16Q569H4 304 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 TBC1D9BQ66K14 1250 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DPP8Q6V1X1 898 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 PABPC3Q9H361 631 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DBR1Q9UK59 544 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 RASGRF2O14827 1237 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 NR3C1P04150 777 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 MYCNP04198 464 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 FRMD5Q7Z6J6 570 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 JAMLQ86YT9 394 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 HAS1Q92839 578 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 KLHL29Q96CT2 875 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 DCCP43146 1447 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 AKAP3O75969 853 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 GHRP10912 638 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 LMNB1P20700 586 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 PEX19P40855 299 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 ASPRV1Q53RT3 343 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 EPS8L3Q8TE67 593 aaKnown RBP12.07□□□□□ -0.48
PTPN7-201ENST00000309017 RFFLQ8WZ73 363 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
PTPN7-201ENST00000309017 BTNL10A8MVZ5 291 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 PAEPP09466 180 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 GCKP35557 465 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 NT5C2P49902 561 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 PLCG2P16885 1265 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 ZNF76P36508 570 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 ADCY2Q08462 1091 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 ADCY1Q08828 1119 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 CALCOCO2Q13137 446 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 CRYMQ14894 314 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 SEL1L2Q5TEA6 688 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 NUGGCQ68CJ6 796 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 SEMA4AQ9H3S1 761 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 ABCF3Q9NUQ8 709 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 PNMA6FA0A0J9YX94 578 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 PPFIA2O75334 1257 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 PSEN1P49768 467 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 CYP2J2P51589 502 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
PTPN7-201ENST00000309017 LRCH2Q5VUJ6 765 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 CLEC4GQ6UXB4 293 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 ADGRF4Q8IZF3 695 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 C18orf8Q96DM3 657 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 RIOX1Q9H6W3 641 aa12.06□□□□□ -0.48
PTPN7-201ENST00000309017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.06□□□□□ -0.485e-11■■■■■ 180.1
PTPN7-201ENST00000309017 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms