RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ZNF302Q9NR11 478 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 RNF181Q9P0P0 153 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 PTPN22Q9Y2R2 807 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CACNA1FO60840 1977 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CLDN3O15551 220 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 GYPCP04921 128 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 PNMA6AP0CW24 399 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ATF2P15336 505 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 GNGT1P63211 74 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 C10orf67Q8IYJ2 551 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 UHMK1Q8TAS1 419 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 FAM213AQ9BRX8 229 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 TEX13BQ9BXU2 312 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ODF2LQ9ULJ1 636 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 LTN1O94822 1766 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 AP5Z1O43299 807 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 CASP8Q14790 479 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZSCAN26Q16670 478 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
PCDHGC3-201ENST00000308177 SMIM22K7EJ46 135 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 YWHABP31946 246 aaKnown RBP12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 THNSL1Q8IYQ7 743 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 NLRP7Q8WX94 980 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 CABS1Q96KC9 395 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 SH2D3AQ9BRG2 576 aa12.33□□□□□ -0.43
PCDHGC3-201ENST00000308177 ALDH3A1P30838 453 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 MAN1A1P33908 653 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 MAPK6Q16659 721 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 AP1M1Q9BXS5 423 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 KBTBD4Q9NVX7 518 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 MRFAP1Q9Y605 127 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PITPNM2Q9BZ72 1349 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 MED1Q15648 1581 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 GOLGA8SH3BPF8 625 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 XPOTO43592 962 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 GMPSP49915 693 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 GRB10Q13322 594 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 KCTD16Q68DU8 428 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 DNAJC24Q6P3W2 148 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PHLDB2Q86SQ0 1253 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 ANKS1AQ92625 1134 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 HDAC6Q9UBN7 1215 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PPFIA4O75335 1185 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 ECE1P42892 770 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PLTPP55058 493 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 BBOF1Q8ND07 529 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 SAAL1Q96ER3 474 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 MTRQ99707 1265 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 DEFB129Q9H1M3 183 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 STIM2Q9P246 746 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
PCDHGC3-201ENST00000308177 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 ANGEL2Q5VTE6 544 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 KRT39Q6A163 491 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 RIT2Q99578 217 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 CAPS2Q9BXY5 557 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 JPH1Q9HDC5 661 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 XRN1Q8IZH2 1706 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 NR3C2P08235 984 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 SHMT1P34896 483 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 PSPC1Q8WXF1 523 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 CCDC188H7C350 402 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 STAMBPO95630 424 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 FGGP02679 453 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 MXRA7P84157 204 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 NCAPHQ15003 741 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 MXRA8Q9BRK3 442 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 FAN1Q9Y2M0 1017 aa12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-201ENST00000308177 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms