RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 KIAA1683Q9H0B3 1180 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 GOLPH3LQ9H4A5 285 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 SMARCAD1Q9H4L7 1026 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CNTNAP1P78357 1384 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 COL22A1Q8NFW1 1626 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 KDM3AQ9Y4C1 1321 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 KLRF2D3W0D1 207 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 TRIM66O15016 1216 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 FGBP02675 491 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CLTAP09496 248 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ATP2A2P16615 1042 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 RPL13P26373 211 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PPP4CP60510 307 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ERVK-9P63128 1117 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ERVK-24P63145 666 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 KRT76Q01546 638 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 RASAL3Q86YV0 1011 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 MAIP1Q8WWC4 291 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 MRPL9Q9BYD2 267 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 FOXP1Q9H334 677 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 KCND1Q9NSA2 647 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PKD2L1Q9P0L9 805 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PQBP1O60828 265 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 NOL3O60936 208 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CTNNA2P26232 953 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ARID4AP29374 1257 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 SFNP31947 248 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ADD2P35612 726 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 GGCXP38435 758 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PEX19P40855 299 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PHKA2P46019 1235 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PRELPP51888 382 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 DYNC1I2Q13409 638 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 BIRC3Q13489 604 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 TRPC3Q13507 836 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CUL1Q13616 776 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PREPLQ4J6C6 727 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 RESP18Q5W5W9 173 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 GBP7Q8N8V2 638 aaPredicted RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 RSPH1Q8WYR4 309 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 SAMD11Q96NU1 681 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 CSRNP2Q9H175 543 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ATP6V0A4Q9HBG4 840 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 RAVER2Q9HCJ3 691 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 USH1CQ9Y6N9 552 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 NDUFA10O95299 355 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PRKAR2AP13861 404 aaKnown RBP6.89□□□□□ -1.31
SCAPER-201ENST00000303521 SATB1Q01826 763 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 C2orf54Q08AI8 447 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PDXDC1Q6P996 788 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 THEM5Q8N1Q8 247 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 PPP1R14CQ8TAE6 165 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
SCAPER-201ENST00000303521 FRMD3A2A2Y4 597 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 PABPN1LA6NDY0 278 aaKnown RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 CFAP73A6NFT4 308 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 B4E1Z4 1266 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 AOC2O75106 756 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 MYL1P05976 194 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 RXRAP19793 462 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 PRDX5P30044 214 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 RFC2P35250 354 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 FLT3LGP49771 235 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 GUCY2DQ02846 1103 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 TTC19Q6DKK2 380 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 THNSL1Q8IYQ7 743 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 KLHDC4Q8TBB5 520 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 ZKSCAN4Q969J2 545 aaPredicted RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 MTA3Q9BTC8 594 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 FUCA2Q9BTY2 467 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 WDR18Q9BV38 432 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 NT5C3AQ9H0P0 336 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 TXLNGQ9NUQ3 528 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 STK38LQ9Y2H1 464 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 CCL5P13501 91 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 FPGSQ05932 587 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 NFX1Q12986 1120 aaKnown RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 Q3C1V9 767 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 CATSPER4Q7RTX7 472 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 PEX26Q7Z412 305 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 CCDC25Q86WR0 208 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 ACRBPQ8NEB7 543 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 COG1Q8WTW3 980 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 ARHGEF2Q92974 986 aaKnown RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 PHKBQ93100 1093 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
SCAPER-201ENST00000303521 EMILIN2Q9BXX0 1053 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 THAP9Q9H5L6 903 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 KCPQ6ZWJ8 1503 aa6.88□□□□□ -1.31
SCAPER-201ENST00000303521 GPR182O15218 404 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms