RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 OSGEPQ9NPF4 335 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 FGFR1OP2Q9NVK5 253 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 STK38LQ9Y2H1 464 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 KLHL33A6NCF5 533 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 EPS15P42566 896 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 CACNB1Q02641 598 aaPredicted RBP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 BNIP1Q12981 228 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 LRRC14Q15048 493 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 SBK1Q52WX2 424 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 IGSF9BQ9UPX0 1349 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 EVI5O60447 810 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 AGTP01019 485 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 H2AFZP0C0S5 128 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 KLRK1P26718 216 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 PRDX5P30044 214 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 ZNF131P52739 623 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 ADCY2Q08462 1091 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 PRPF4BQ13523 1007 aaKnown RBP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 H2AFVQ71UI9 128 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 GJA10Q969M2 543 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 NSRP1Q9H0G5 558 aaKnown RBP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 GRHL1Q9NZI5 618 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 PPP1R9AQ9ULJ8 1098 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 DAAM1Q9Y4D1 1078 aa11.8□□□□□ -0.52
ZNF558-201ENST00000301475 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
ZNF558-201ENST00000301475 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 KLRF2D3W0D1 207 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 KIAA0391O15091 583 aaKnown RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 DDX3YO15523 660 aaKnown RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 KCNQ2O43526 872 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 FLOT1O75955 427 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 FGFR4P22455 802 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 PRKCIP41743 596 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 MSH2P43246 934 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 PDE6CP51160 858 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 COPS2P61201 443 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 THEMIS2Q5TEJ8 643 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 COL23A1Q86Y22 540 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 JAMLQ86YT9 394 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 SCFD1Q8WVM8 642 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 TTC7AQ9ULT0 858 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 STX8Q9UNK0 236 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 PCDHA2Q9Y5H9 948 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 A6NHS1 94 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 AP1G2O75843 785 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 GNA14O95837 355 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 ATP2A2P16615 1042 aaKnown RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 TNFAIP8L3Q5GJ75 292 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 AP1ARQ63HQ0 302 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 ASRGL1Q7L266 308 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 MGARPQ8TDB4 240 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 FAM84BQ96KN1 310 aaPredicted RBP11.79□□□□□ -0.52
ZNF558-201ENST00000301475 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 C6orf50Q9HD87 102 aa11.79□□□□□ -0.52
ZNF558-201ENST00000301475 A0A0A6YYK5 440 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 LIN7AO14910 233 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 PON1P27169 355 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 ADAM9Q13443 819 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 AUHQ13825 339 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 PLS1Q14651 629 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 GJB7Q6PEY0 223 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 FITM2Q8N6M3 262 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 MARCH10Q8NA82 808 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 RMDN2Q96LZ7 410 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 HOMER3Q9NSC5 361 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 ANKRD33BA6NCL7 494 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 HGSO14964 777 aaPredicted RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 CREB1P16220 341 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 GNA11P29992 359 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 AADACL2Q6P093 401 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 ZC3H3Q8IXZ2 948 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 SYCE1Q8N0S2 351 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 TBC1D16Q8TBP0 767 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 U2AF1L4Q8WU68 220 aaKnown RBP11.78□□□□□ -0.52
ZNF558-201ENST00000301475 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
ZNF558-201ENST00000301475 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms