RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TISP43B9A030 160 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 CALUO43852 315 aaPredicted RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 RPS6KA5O75582 802 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 XRCC5P13010 732 aaKnown RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 HMGCS2P54868 508 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 TRAPPC11Q7Z392 1133 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 FAM178BQ8IXR5 827 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 TYW1Q9NV66 732 aaKnown RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 SAR1BQ9Y6B6 198 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 FER1L6Q2WGJ9 1857 aa24■■□□□ 1.43
TPM4-201ENST00000300933 ZMYM2Q9UBW7 1377 aa24■■□□□ 1.43
TPM4-201ENST00000300933 DHX15O43143 795 aaKnown RBP24■■□□□ 1.43
TPM4-201ENST00000300933 PEX10O60683 326 aa24■■□□□ 1.43
TPM4-201ENST00000300933 CXCR5P32302 372 aa24■■□□□ 1.43
TPM4-201ENST00000300933 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
TPM4-201ENST00000300933 EPHA7Q15375 998 aa24■■□□□ 1.43
TPM4-201ENST00000300933 FIZ1Q96SL8 496 aa24■■□□□ 1.43
TPM4-201ENST00000300933 MTFR1LQ9H019 292 aa24■■□□□ 1.43
TPM4-201ENST00000300933 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
TPM4-201ENST00000300933 TESPA1A2RU30 521 aaPredicted RBP24■■□□□ 1.43
TPM4-201ENST00000300933 ARHGEF35A5YM69 484 aa24■■□□□ 1.43
TPM4-201ENST00000300933 HIP1RO75146 1068 aa24■■□□□ 1.43
TPM4-201ENST00000300933 DNA2P51530 1060 aa24■■□□□ 1.43
TPM4-201ENST00000300933 MTMR1Q13613 665 aa24■■□□□ 1.43
TPM4-201ENST00000300933 FOXR2Q6PJQ5 311 aa24■■□□□ 1.43
TPM4-201ENST00000300933 PPP4R3CPQ6ZMV5 832 aa24■■□□□ 1.43
TPM4-201ENST00000300933 ZC3H3Q8IXZ2 948 aaKnown RBP24■■□□□ 1.43
TPM4-201ENST00000300933 TRPM4Q8TD43 1214 aa24■■□□□ 1.43
TPM4-201ENST00000300933 ADAMTS1Q9UHI8 967 aa24■■□□□ 1.43
TPM4-201ENST00000300933 AJAP1Q9UKB5 411 aaPredicted RBP24■■□□□ 1.43
TPM4-201ENST00000300933 PPP1R9AQ9ULJ8 1098 aa24■■□□□ 1.43
TPM4-201ENST00000300933 NAP1L1P55209 391 aaKnown RBP23.99■■□□□ 1.43
TPM4-201ENST00000300933 WHAMMP3Q1A5X7 153 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 LPAR1Q92633 364 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 RMDN3Q96TC7 470 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 JRKLQ9Y4A0 524 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 STK24Q9Y6E0 443 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 ATAD5Q96QE3 1844 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 NCK2O43639 380 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 SETQ01105 290 aaPredicted RBP23.99■■□□□ 1.43
TPM4-201ENST00000300933 ASTE1Q2TB18 679 aaPredicted RBP23.99■■□□□ 1.43
TPM4-201ENST00000300933 B3GNT9Q6UX72 402 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 DAW1Q8N136 415 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 SMARCAL1Q9NZC9 954 aa23.99■■□□□ 1.43
TPM4-201ENST00000300933 ZMYND10O75800 440 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 AFPP02771 609 aaKnown RBP23.98■■□□□ 1.43
TPM4-201ENST00000300933 UGCGQ16739 394 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 ZNF720Q7Z2F6 126 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 GANQ9H2C0 597 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 ACBD3Q9H3P7 528 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 OLFML3Q9NRN5 406 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 TELO2Q9Y4R8 837 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 SP4Q02446 784 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 TUBB2AQ13885 445 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 SLC9C1Q4G0N8 1177 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 PADI6Q6TGC4 694 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 FRMD5Q7Z6J6 570 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 TUBB2BQ9BVA1 445 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 PACSIN1Q9BY11 444 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 AGO4Q9HCK5 861 aaKnown RBP23.98■■□□□ 1.43
TPM4-201ENST00000300933 FAM184BQ9ULE4 1060 aa23.98■■□□□ 1.43
TPM4-201ENST00000300933 A0A087X0T9 212 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 PDE2AO00408 941 aaPredicted RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 SYF2O95926 243 aaKnown RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 FAM228BP0C875 321 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 PON1P27169 355 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 CORO7P57737 925 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 MRPS25P82663 173 aaKnown RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 BAATQ14032 418 aaPredicted RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 EXOC3L4Q17RC7 722 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 MSL3Q8N5Y2 521 aaKnown RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 AFAP1L1Q8TED9 768 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 SLC35C1Q96A29 364 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 MED4Q9NPJ6 270 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 GPRC5CQ9NQ84 441 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 VWA5AO00534 786 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 USO1O60763 962 aaKnown RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 PGM5Q15124 567 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 RNF207Q6ZRF8 634 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 PCIF1Q9H4Z3 704 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 EHD2Q9NZN4 543 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 TRIM49P0CI25 452 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 TRIM49CP0CI26 452 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 EPB41P11171 864 aaKnown RBP23.97■■□□□ 1.43
TPM4-201ENST00000300933 KLHL30Q0D2K2 578 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 IQCDQ96DY2 449 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 RIT2Q99578 217 aa23.97■■□□□ 1.43
TPM4-201ENST00000300933 UCHL3P15374 230 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 GAP43P17677 238 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 HOXA7P31268 230 aaPredicted RBP23.96■■□□□ 1.43
TPM4-201ENST00000300933 BMT2Q1RMZ1 405 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 MCF2L2Q86YR7 1114 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 FRMPD4Q14CM0 1322 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 RPTORQ8N122 1335 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
TPM4-201ENST00000300933 RPL13P26373 211 aaKnown RBP23.96■■□□□ 1.43
TPM4-201ENST00000300933 NPEPPSP55786 919 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 BACE1P56817 501 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 TUBB4BP68371 445 aa23.96■■□□□ 1.43
TPM4-201ENST00000300933 MAPK7Q13164 816 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms