RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TRIM50Q86XT4 487 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 SUGP1Q8IWZ8 645 aaKnown RBP23.68■■□□□ 1.38
SMCO4-201ENST00000298966 LMBR1Q8WVP7 490 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 CUL5Q93034 780 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 PBXIP1Q96AQ6 731 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 GPR20Q99678 358 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 RC3H2Q9HBD1 1191 aaKnown RBP23.68■■□□□ 1.38
SMCO4-201ENST00000298966 GDPD2Q9HCC8 539 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 RIC8AQ9NPQ8 531 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 M0R2N6 131 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 STAM2O75886 525 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 CHRNA1P02708 482 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 ICAM3P32942 547 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 NR5A1Q13285 461 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 OXER1Q8TDS5 423 aa23.67■■□□□ 1.38
SMCO4-201ENST00000298966 ALG13Q9NP73 1137 aaKnown RBP23.67■■□□□ 1.38
SMCO4-201ENST00000298966 TFIP11Q9UBB9 837 aaKnown RBP23.67■■□□□ 1.38
SMCO4-201ENST00000298966 NRCAMQ92823 1304 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 CCDC194A0A1B0GVG4 234 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 ENPP3O14638 875 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 ORC2Q13416 577 aaPredicted RBP23.66■■□□□ 1.38
SMCO4-201ENST00000298966 STK38Q15208 465 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 RSPH3Q86UC2 560 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 REXO1Q8N1G1 1221 aaKnown RBP23.66■■□□□ 1.38
SMCO4-201ENST00000298966 P2RX5Q93086 422 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 INPP4AQ96PE3 977 aaPredicted RBP23.66■■□□□ 1.38
SMCO4-201ENST00000298966 EHMT1Q9H9B1 1298 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 PLAGL2Q9UPG8 496 aa23.66■■□□□ 1.38
SMCO4-201ENST00000298966 SPATA31C2B4DYI2 1134 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 PPP6R2O75170 966 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 EYA4O95677 639 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 SLC39A14Q15043 492 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 IER5LQ5T953 404 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 TAF2Q6P1X5 1199 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 LINC00301Q8NCQ3 95 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 GPT2Q8TD30 523 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 ZNF689Q96CS4 500 aaPredicted RBP23.65■■□□□ 1.38
SMCO4-201ENST00000298966 MSLNLQ96KJ4 702 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.65■■□□□ 1.38
SMCO4-201ENST00000298966 PCDHA6Q9UN73 950 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 PCDHA8Q9Y5H6 950 aa23.65■■□□□ 1.38
SMCO4-201ENST00000298966 MRPS9P82933 396 aaKnown RBP23.64■■□□□ 1.37
SMCO4-201ENST00000298966 LPIN1Q14693 890 aa23.64■■□□□ 1.37
SMCO4-201ENST00000298966 SF3A1Q15459 793 aaKnown RBP23.64■■□□□ 1.37
SMCO4-201ENST00000298966 SPTLC2O15270 562 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 GADD45BO75293 160 aaPredicted RBP23.63■■□□□ 1.37
SMCO4-201ENST00000298966 DGKIO75912 1065 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 ZXDAP98168 799 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 SP4Q02446 784 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 SEMA3FQ13275 785 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 AP3B2Q13367 1082 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 CAMK1Q14012 370 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 NONOQ15233 471 aaKnown RBP eCLIP23.63■■□□□ 1.37
SMCO4-201ENST00000298966 NAALADL2Q58DX5 795 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 EFHBQ8N7U6 833 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 SYAP1Q96A49 352 aaPredicted RBP23.63■■□□□ 1.37
SMCO4-201ENST00000298966 PSTPIP2Q9H939 334 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 CACNA1HO95180 2353 aa23.63■■□□□ 1.37
SMCO4-201ENST00000298966 FRMPD4Q14CM0 1322 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 LOC730098B7Z3J9 87 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 MGAT3Q09327 533 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 PIK3AP1Q6ZUJ8 805 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 CMTR2Q8IYT2 770 aaKnown RBP23.62■■□□□ 1.37
SMCO4-201ENST00000298966 FBXL6Q8N531 539 aa23.62■■□□□ 1.37
SMCO4-201ENST00000298966 NAP1L4Q99733 375 aaKnown RBP23.62■■□□□ 1.37
SMCO4-201ENST00000298966 KIAA1671Q9BY89 1806 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 FOSP01100 380 aaPredicted RBP23.61■■□□□ 1.37
SMCO4-201ENST00000298966 TOB1P50616 345 aaPredicted RBP23.61■■□□□ 1.37
SMCO4-201ENST00000298966 COASYQ13057 564 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 PPFIA1Q13136 1202 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 FBXO47Q5MNV8 452 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 TTC38Q5R3I4 469 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 SMRP1Q8NCR6 262 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 SPPL3Q8TCT6 385 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 SENP7Q9BQF6 1050 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 CLEC1BQ9P126 229 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 CLIC4Q9Y696 253 aa23.61■■□□□ 1.37
SMCO4-201ENST00000298966 MRPL42Q9Y6G3 142 aaKnown RBP23.61■■□□□ 1.37
SMCO4-201ENST00000298966 A0A1W2PQ27 194 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 A0A1W2PQ64 194 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 A0A1W2PQD8 194 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 PIK3CDO00329 1044 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 ITGB1P05556 798 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 CLK2P49760 499 aaKnown RBP23.6■■□□□ 1.37
SMCO4-201ENST00000298966 PTPAQ15257 358 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 ADALQ6DHV7 355 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 TSHZ1Q6ZSZ6 1077 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 ADGRD2Q7Z7M1 963 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 GIMAP8Q8ND71 665 aaPredicted RBP23.6■■□□□ 1.37
SMCO4-201ENST00000298966 TUBE1Q9UJT0 475 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 TELO2Q9Y4R8 837 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 KMT2EQ8IZD2 1858 aa23.6■■□□□ 1.37
SMCO4-201ENST00000298966 ZFHX2Q9C0A1 2572 aaPredicted RBP23.59■■□□□ 1.37
SMCO4-201ENST00000298966 LAD1O00515 517 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 DNAJB1P25685 340 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 TCF7P36402 384 aaPredicted RBP23.59■■□□□ 1.37
SMCO4-201ENST00000298966 ME1P48163 572 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 NRIP1P48552 1158 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms