RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 NT5C3AQ9H0P0 336 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 CCDC87Q9NVE4 849 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 SPOPO43791 374 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 CYP4A11Q02928 519 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 MESDQ14696 234 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SEL1L2Q5TEA6 688 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 ARHGEF2Q92974 986 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 ETNK1Q9HBU6 452 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 BATF3Q9NR55 127 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 BCS1LQ9Y276 419 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 MYH7BA7E2Y1 1941 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SFI1A8K8P3 1242 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SLC8A3P57103 927 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 PICALMQ13492 652 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 PLS1Q14651 629 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 BZW1Q7L1Q6 419 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 C18orf8Q96DM3 657 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 LBHD1Q9BQE6 289 aaPredicted RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SMIM24O75264 130 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 ATP2A2P16615 1042 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SETDB1Q15047 1291 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 CCDC6Q16204 474 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SLC35G1Q2M3R5 365 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SLC17A8Q8NDX2 589 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 SUCLA2Q9P2R7 463 aaPredicted RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
TRUB1-201ENST00000298746 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
TRUB1-201ENST00000298746 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 STAT3P40763 770 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 KCNJ1P48048 391 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 SNX1Q13596 522 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 TRMT1LQ7Z2T5 733 aaKnown RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 ERICH1Q86X53 443 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 MTFR1LQ9H019 292 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 GBP1P32455 592 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 SLC16A2P36021 539 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 MXRA7P84157 204 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 ITIH4Q14624 930 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 NT5DC3Q86UY8 548 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 MAGEC3Q8TD91 643 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 SCFD1Q8WVM8 642 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 BTG4Q9NY30 223 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 TMEM59LQ9UK28 342 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 CCDC189A1A4V9 331 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 ASAP2O43150 1006 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 FERP16591 822 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 PON1P27169 355 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF449Q6P9G9 518 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 SFR1Q86XK3 245 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 EIF1ADQ8N9N8 165 aaKnown RBP12.33□□□□□ -0.44
TRUB1-201ENST00000298746 CEP95Q96GE4 821 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
TRUB1-201ENST00000298746 AGTP01019 485 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 GSTA1P08263 222 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 CCND1P24385 295 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 CYP2J2P51589 502 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 ECM1Q16610 540 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 CROCCP2Q86T23 111 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 LMNTD2Q8IXW0 634 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 OSBPL1AQ9BXW6 950 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 DNM3Q9UQ16 869 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 LRP6O75581 1613 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 M0R2N6 131 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 FGRP09769 529 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 ZNF76P36508 570 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 MSH2P43246 934 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 COPS2P61201 443 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
TRUB1-201ENST00000298746 CLEC10AQ8IUN9 316 aa12.32□□□□□ -0.44
TRUB1-201ENST00000298746 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
TRUB1-201ENST00000298746 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
TRUB1-201ENST00000298746 GANQ9H2C0 597 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms