RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 COA1Q9GZY4 146 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 RASAL2Q9UJF2 1139 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 RGS16O15492 202 aaPredicted RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 PRLRP16471 622 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 ACTN3Q08043 901 aaPredicted RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 TNIP1Q15025 636 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 NBPF9Q3BBW0 867 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 ZNF473Q8WTR7 871 aaKnown RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 PURBQ96QR8 312 aaKnown RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 GLT8D2Q9H1C3 349 aa16.74■□□□□ 0.27
CAPN2-201ENST00000295006 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.74■□□□□ 0.27
CAPN2-201ENST00000295006 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
CAPN2-201ENST00000295006 MDH1P40925 334 aaKnown RBP16.73■□□□□ 0.27
CAPN2-201ENST00000295006 DR1Q01658 176 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 SEL1L2Q5TEA6 688 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 EDEM3Q9BZQ6 932 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 TYW1Q9NV66 732 aaKnown RBP16.73■□□□□ 0.27
CAPN2-201ENST00000295006 USTQ9Y2C2 406 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 KCNJ1P48048 391 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
CAPN2-201ENST00000295006 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 GIMAP7Q8NHV1 300 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 EML1O00423 815 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 MSH4O15457 936 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 FLT3P36888 993 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 TPCN2Q8NHX9 752 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 BAIAP2L1Q9UHR4 511 aa16.73■□□□□ 0.27
CAPN2-201ENST00000295006 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.73■□□□□ 0.27
CAPN2-201ENST00000295006 HNRNPH3P31942 346 aaKnown RBP16.72■□□□□ 0.27
CAPN2-201ENST00000295006 USP11P51784 963 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 SEMA3FQ13275 785 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 TAB3Q8N5C8 712 aaPredicted RBP16.72■□□□□ 0.27
CAPN2-201ENST00000295006 TAOK3Q9H2K8 898 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 ACP6Q9NPH0 428 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 MTRF1LQ9UGC7 380 aaKnown RBP16.72■□□□□ 0.27
CAPN2-201ENST00000295006 TBK1Q9UHD2 729 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
CAPN2-201ENST00000295006 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 GYS1P13807 737 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 ECE1P42892 770 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 CALCOCO2Q13137 446 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 GLI3P10071 1580 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 TISP43B9A030 160 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 BCRP11274 1271 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 LRRC14Q15048 493 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 GRIPAP1Q4V328 841 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 UBL4BQ8N7F7 174 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 TBC1D31Q96DN5 1066 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 BTBD6Q96KE9 485 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 RAB17Q9H0T7 212 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 PNMA2Q9UL42 364 aa16.72■□□□□ 0.27
CAPN2-201ENST00000295006 ACSL3O95573 720 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 FTLP02792 175 aaPredicted RBP16.71■□□□□ 0.27
CAPN2-201ENST00000295006 ALAS1P13196 640 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 ZKSCAN8Q15776 578 aaPredicted RBP16.71■□□□□ 0.27
CAPN2-201ENST00000295006 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 FRMD5Q7Z6J6 570 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.27
CAPN2-201ENST00000295006 LRRC4BQ9NT99 713 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 EPN3Q9H201 632 aa16.71■□□□□ 0.27
CAPN2-201ENST00000295006 ABCB11O95342 1321 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 PJA2O43164 708 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 LMNB1P20700 586 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 FGFR4P22455 802 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 RPA1P27694 616 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 C2CD6Q53TS8 623 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.26
CAPN2-201ENST00000295006 GKAP1Q5VSY0 366 aaPredicted RBP16.71■□□□□ 0.26
CAPN2-201ENST00000295006 RBM46Q8TBY0 533 aaKnown RBP16.71■□□□□ 0.26
CAPN2-201ENST00000295006 FAM118BQ9BPY3 351 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 ADAM33Q9BZ11 813 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.26
CAPN2-201ENST00000295006 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.264e-13■■■■■ 47.3
CAPN2-201ENST00000295006 RAD17O75943 681 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 ORC2Q13416 577 aaPredicted RBP16.7■□□□□ 0.26
CAPN2-201ENST00000295006 MTMR3Q13615 1198 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 EPC2Q52LR7 807 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 SEPT12Q8IYM1 358 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 PDXKO00764 312 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
CAPN2-201ENST00000295006 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
CAPN2-201ENST00000295006 STAT2P52630 851 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 RINT1Q6NUQ1 792 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 ARHGEF10LQ9HCE6 1279 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 TAS2R14Q9NYV8 317 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
CAPN2-201ENST00000295006 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
CAPN2-201ENST00000295006 GMNCA6NCL1 334 aa16.69■□□□□ 0.26
CAPN2-201ENST00000295006 MMP10P09238 476 aa16.69■□□□□ 0.26
CAPN2-201ENST00000295006 CLTAP09496 248 aa16.69■□□□□ 0.26
CAPN2-201ENST00000295006 IL1R1P14778 569 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms