RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 FAM13AO94988 1023 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 CCDC172P0C7W6 258 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 SLURP2P0DP57 97 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 LMNB1P20700 586 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 ERVK-9P63128 1117 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 B4GALNT4Q76KP1 1039 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 FAM186BQ8IYM0 893 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 SEPT12Q8IYM1 358 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 METTL13Q8N6R0 699 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 SERPINA10Q9UK55 444 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 NCANO14594 1321 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 SLX4Q8IY92 1834 aa14.91□□□□□ -0.02
NCSTN-201ENST00000294785 DDX3XO00571 662 aaKnown RBP eCLIP14.9□□□□□ -0.026e-10■■□□□ 12.9
NCSTN-201ENST00000294785 NR1D1P20393 614 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 ECHS1P30084 290 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 PPP2R5CQ13362 524 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 MAATS1Q7Z4T9 603 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 SLC30A5Q8TAD4 765 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 HES6Q96HZ4 224 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 STK33Q9BYT3 514 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 PARVGQ9HBI0 331 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 SART1O43290 800 aaKnown RBP14.9□□□□□ -0.02
NCSTN-201ENST00000294785 SOX5P35711 763 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
NCSTN-201ENST00000294785 MTMR3Q13615 1198 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 PPP2R5AQ15172 486 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 SHROOM1Q2M3G4 852 aaPredicted RBP14.9□□□□□ -0.02
NCSTN-201ENST00000294785 C1orf186Q6ZWK4 172 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 TADA2BQ86TJ2 420 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 ARFGAP2Q8N6H7 521 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 CCDC26Q8TAB7 109 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 MASTLQ96GX5 879 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
NCSTN-201ENST00000294785 TMCO5BA8MYB1 307 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 EML1O00423 815 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 CLIC2O15247 247 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 RFX1P22670 979 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 CACNB3P54284 484 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 HLTFQ14527 1009 aaKnown RBP eCLIP14.89□□□□□ -0.03
NCSTN-201ENST00000294785 CLUL1Q15846 466 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 TTC31Q49AM3 519 aaPredicted RBP14.89□□□□□ -0.03
NCSTN-201ENST00000294785 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 PAGR1Q9BTK6 254 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 AJAP1Q9UKB5 411 aaPredicted RBP14.89□□□□□ -0.03
NCSTN-201ENST00000294785 ODF2LQ9ULJ1 636 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 PLAAQ9Y263 795 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 FAM169AQ9Y6X4 670 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 F8VZ95 297 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 KRIT1O00522 736 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 EVI5O60447 810 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 ENTPD3O75355 529 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 TMEM253P0C7T8 217 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 FMO5P49326 533 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 ZNF131P52739 623 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 PDCLQ13371 301 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
NCSTN-201ENST00000294785 KCTD16Q68DU8 428 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 HS2ST1Q7LGA3 356 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 SH2D3CQ8N5H7 860 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 MYCT1Q8N699 235 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 SEC14L1Q92503 715 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 EFCC1Q9HA90 598 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 TMBIM4Q9HC24 238 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 AMFRQ9UKV5 643 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 NDUFAB1O14561 156 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 PSMD10O75832 226 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 RBM5P52756 815 aaKnown RBP eCLIP14.89□□□□□ -0.03
NCSTN-201ENST00000294785 RFFLQ8WZ73 363 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 SLC5A5Q92911 643 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 EPN3Q9H201 632 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 EHMT1Q9H9B1 1298 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 RGL1Q9NZL6 768 aa14.89□□□□□ -0.03
NCSTN-201ENST00000294785 SLITRK3O94933 977 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 GDF11O95390 407 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 HOXA13P31271 388 aaPredicted RBP14.88□□□□□ -0.03
NCSTN-201ENST00000294785 SNAP25P60880 206 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 KCNA1Q09470 495 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 LRCH2Q5VUJ6 765 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 U2AF1L4Q8WU68 220 aaKnown RBP14.88□□□□□ -0.03
NCSTN-201ENST00000294785 RNPC3Q96LT9 517 aaKnown RBP14.88□□□□□ -0.03
NCSTN-201ENST00000294785 DBNDD1Q9H9R9 158 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 PRR12Q9ULL5 1215 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 FRMD4BQ9Y2L6 1034 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 SCN9AQ15858 1988 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 UBAP1LF5GYI3 381 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 PPP1R37O75864 691 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 LSP1P33241 339 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 HSD17B3P37058 310 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 GALCP54803 685 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 ITGB3BPQ13352 177 aaPredicted RBP14.88□□□□□ -0.03
NCSTN-201ENST00000294785 BIRC3Q13489 604 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 TRADDQ15628 312 aa14.88□□□□□ -0.03
NCSTN-201ENST00000294785 RUFY4Q6ZNE9 571 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms