RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 LRRC57Q8N9N7 239 aa21.78■■□□□ 1.08
SCUBE1-201ENST00000290460 USP38Q8NB14 1042 aa21.78■■□□□ 1.08
SCUBE1-201ENST00000290460 ZNF577Q9BSK1 485 aa21.78■■□□□ 1.08
SCUBE1-201ENST00000290460 RANBP17Q9H2T7 1088 aaKnown RBP21.78■■□□□ 1.08
SCUBE1-201ENST00000290460 DDX39AO00148 427 aaKnown RBP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 DDX3XO00571 662 aaKnown RBP eCLIP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 KIF4AO95239 1232 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 FAM178BQ8IXR5 827 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 BANK1Q8NDB2 785 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 FAM76AQ8TAV0 307 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 TAF4BQ92750 862 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 CAVIN3Q969G5 261 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 CWC15Q9P013 229 aaKnown RBP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 PKD2L1Q9P0L9 805 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 ZNF70Q9UC06 446 aaPredicted RBP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 LCMT1Q9UIC8 334 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 FRMPD4Q14CM0 1322 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 VIL1P09327 827 aaKnown RBP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 TRIM49P0CI25 452 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 TRIM49CP0CI26 452 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 SLC15A2Q16348 729 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 ZNF720Q7Z2F6 126 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 VEZTQ9HBM0 779 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 FBXL5Q9UKA1 691 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 NENFQ9UMX5 172 aa21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 ZBTB12Q9Y330 459 aaPredicted RBP21.77■■□□□ 1.08
SCUBE1-201ENST00000290460 RAD51CO43502 376 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 RPS6KA5O75582 802 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 PLS1Q14651 629 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 CBWD6Q4V339 395 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 CBWD3Q5JTY5 395 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 CBWD5Q5RIA9 395 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 ODR4Q5SWX8 454 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 U2AF1L4Q8WU68 220 aaKnown RBP21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 CASKIN2Q8WXE0 1202 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 LXNQ9BS40 222 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 TMEM39BQ9GZU3 492 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 SYNPO2Q9UMS6 1093 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 CNTNAP1P78357 1384 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 EVI5O60447 810 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 FMO5P49326 533 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 GUCY2FP51841 1108 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 TPCN2Q8NHX9 752 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 SH3GL2Q99962 352 aa21.76■■□□□ 1.07
SCUBE1-201ENST00000290460 PSME4Q14997 1843 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 GTPBP10A4D1E9 387 aaKnown RBP21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 MAEAQ7L5Y9 396 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 PROCA1Q8NCQ7 364 aaPredicted RBP21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 ARL8AQ96BM9 186 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 AGPAT3Q9NRZ7 376 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 PPP1R12BO60237 982 aaPredicted RBP21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 CEP104O60308 925 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 LDHDQ86WU2 507 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 RDH13Q8NBN7 331 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 OLIG1Q8TAK6 271 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 LNX1Q8TBB1 728 aaPredicted RBP21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 CHURC1Q8WUH1 139 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 FAM151AQ8WW52 585 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 ZIM3Q96PE6 472 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 NACC1Q96RE7 527 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 VCPKMTQ9H867 229 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 BCS1LQ9Y276 419 aa21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
SCUBE1-201ENST00000290460 TMCO5BA8MYB1 307 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 F8VZ95 297 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 TULP2O00295 520 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 IPO5O00410 1097 aaKnown RBP21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 HSF2BPO75031 334 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 IVLP07476 585 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 H2AFZP0C0S5 128 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 ZNF131P52739 623 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 SKIDA1Q1XH10 827 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 TTMPQ5BVD1 217 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 RSBN1LQ6PCB5 846 aaPredicted RBP21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 H2AFVQ71UI9 128 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 VPS36Q86VN1 386 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 GLYCTKQ8IVS8 523 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 KCTD17Q8N5Z5 321 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 AP1M1Q9BXS5 423 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 TMEM59LQ9UK28 342 aa21.74■■□□□ 1.07
SCUBE1-201ENST00000290460 KRT14P02533 472 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 STAT1P42224 750 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 TRAF1Q13077 416 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 PAK2Q13177 524 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 DNAJC21Q5F1R6 531 aaKnown RBP21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 HS2ST1Q7LGA3 356 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 METTL13Q8N6R0 699 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 CCDC43Q96MW1 224 aaKnown RBP21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 RUFY1Q96T51 708 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 DNAJC12Q9UKB3 198 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 SCAF8Q9UPN6 1271 aaKnown RBP21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 FERP16591 822 aa21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 DRAP1Q14919 205 aaPredicted RBP21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 IFI16Q16666 785 aaKnown RBP21.73■■□□□ 1.07
SCUBE1-201ENST00000290460 HIP1RO75146 1068 aa21.72■■□□□ 1.07
SCUBE1-201ENST00000290460 ZBTB48P10074 688 aaPredicted RBP21.72■■□□□ 1.07
SCUBE1-201ENST00000290460 SOX5P35711 763 aa21.72■■□□□ 1.07
SCUBE1-201ENST00000290460 GALCP54803 685 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms