RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CCDC194A0A1B0GVG4 234 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 GPR182O15218 404 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 SLC37A4O43826 429 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 MGEA5O60502 916 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 SEC24BO95487 1268 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 RB1P06400 928 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 FDPSP14324 419 aaKnown RBP11.79□□□□□ -0.52
SNF8-201ENST00000290330 CTNNB1P35222 781 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 NEK4P51957 841 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 TARBP2Q15633 366 aaKnown RBP11.79□□□□□ -0.52
SNF8-201ENST00000290330 ODR4Q5SWX8 454 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 PPP4R3AQ6IN85 833 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 NEK8Q86SG6 692 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 FAM228AQ86W67 206 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 WASF1Q92558 559 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 UHRF1Q96T88 793 aaPredicted RBP11.79□□□□□ -0.52
SNF8-201ENST00000290330 ADAM2Q99965 735 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
SNF8-201ENST00000290330 RWDD3Q9Y3V2 267 aa11.79□□□□□ -0.52
SNF8-201ENST00000290330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 C9IYK1 514 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 STBD1O95210 358 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 GCFC2P16383 781 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 TMOD1P28289 359 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 SARSP49591 514 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 NLRP11P59045 1033 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 EARS2Q5JPH6 523 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 SLC24A5Q71RS6 500 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 GTF3C6Q969F1 213 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 FAM20AQ96MK3 541 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 NECAB3Q96P71 396 aaPredicted RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 MAP7D2Q96T17 732 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 NIFKQ9BYG3 293 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 ADAMTS10Q9H324 1103 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 AKT3Q9Y243 479 aa11.78□□□□□ -0.52
SNF8-201ENST00000290330 MRPL42Q9Y6G3 142 aaKnown RBP11.78□□□□□ -0.52
SNF8-201ENST00000290330 DENND3A2RUS2 1198 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 TMEM150BA6NC51 233 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 EML1O00423 815 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 GRM6O15303 877 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 GATMP50440 423 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 PPP2R5CQ13362 524 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 C8orf34Q49A92 452 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 HAS1Q92839 578 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 PLVAPQ9BX97 442 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 NSUN3Q9H649 340 aaKnown RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 UBE2ZQ9H832 354 aaPredicted RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 VAV3Q9UKW4 847 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
SNF8-201ENST00000290330 MYH9P35579 1960 aaKnown RBP11.77□□□□□ -0.53
SNF8-201ENST00000290330 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 TBX3O15119 743 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
SNF8-201ENST00000290330 IBSPP21815 317 aaPredicted RBP11.76□□□□□ -0.53
SNF8-201ENST00000290330 GPC3P51654 580 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 PSMC5P62195 406 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 FAM189BP81408 668 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 NR5A1Q13285 461 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 DRP2Q13474 957 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 DSC3Q14574 896 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 PAN2Q504Q3 1202 aaKnown RBP11.76□□□□□ -0.53
SNF8-201ENST00000290330 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 ANO5Q75V66 913 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 TNFRSF25Q93038 417 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 P2RX5Q93086 422 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
SNF8-201ENST00000290330 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
SNF8-201ENST00000290330 SH2D3AQ9BRG2 576 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 LMAN2LQ9H0V9 348 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 PLAGL2Q9UPG8 496 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 EVPLQ92817 2033 aa11.76□□□□□ -0.53
SNF8-201ENST00000290330 MUC3AQ02505 3323 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 SPTBN5Q9NRC6 3674 aaKnown RBP11.75□□□□□ -0.53
SNF8-201ENST00000290330 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 JAK2O60674 1132 aa11.75□□□□□ -0.53
SNF8-201ENST00000290330 MMP1P03956 469 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms