RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 GJB2P29033 226 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 CLCN1P35523 988 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 TRAPPC10P48553 1259 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 JAK3P52333 1124 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 CHMP4BP1P59074 171 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 EPHA7Q15375 998 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 IL17AQ16552 155 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 TAF2Q6P1X5 1199 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 PSRC1Q6PGN9 363 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-201ENST00000288344 ANO5Q75V66 913 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 DNAJB3Q8WWF6 145 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 INTS4Q96HW7 963 aaKnown RBP10.33□□□□□ -0.76
HMGN1-201ENST00000288344 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
HMGN1-201ENST00000288344 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 TUBE1Q9UJT0 475 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 LOXHD1Q8IVV2 1947 aa10.33□□□□□ -0.76
HMGN1-201ENST00000288344 COL1A2P08123 1366 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 MYO9BQ13459 2157 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 GPR32O75388 356 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 LYPLA2O95372 231 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 THPOP40225 353 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 ORC2Q13416 577 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 LPIN1Q14693 890 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 FAM160B1Q5W0V3 765 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 OTOP2Q7RTS6 562 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 DEFB128Q7Z7B8 93 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 RTN4RL1Q86UN2 441 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 C4orf19Q8IY42 314 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 NME8Q8N427 588 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 DBF4BQ8NFT6 615 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 TTYH1Q9H313 450 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 AGO3Q9H9G7 860 aaKnown RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
HMGN1-201ENST00000288344 RGL1Q9NZL6 768 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 SQORQ9Y6N5 450 aa10.32□□□□□ -0.76
HMGN1-201ENST00000288344 TTC3P53804 2025 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 TMEM150BA6NC51 233 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 ZBTB39O15060 712 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 OATP04181 439 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 P4HBP07237 508 aaKnown RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 COL9A1P20849 921 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 PRSS12P56730 875 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 TRIM29Q14134 588 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 XKR3Q5GH77 459 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 FBXO47Q5MNV8 452 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 MICAL3Q7RTP6 2002 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 MIER3Q7Z3K6 550 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 SLFN12Q8IYM2 578 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 PHOSPHO2Q8TCD6 241 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 TMEM40Q8WWA1 233 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 GBF1Q92538 1859 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 TNPO1Q92973 898 aaKnown RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 ADAMTS10Q9H324 1103 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 TTC12Q9H892 705 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-201ENST00000288344 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 MTMR10Q9NXD2 777 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 PCDHA12Q9UN75 941 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 PCDHB6Q9Y5E3 794 aa10.31□□□□□ -0.76
HMGN1-201ENST00000288344 ABHD14A-ACY1A0A1B0GW23 586 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 BACH1O14867 736 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 BAIAP3O94812 1187 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 QARSP47897 775 aaKnown RBP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 PSMC5P62195 406 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 PRKCEQ02156 737 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 DRP2Q13474 957 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 SAFBQ15424 915 aaKnown RBP eCLIP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 ZNF174Q15697 407 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.761e-8■■■□□ 16.2
HMGN1-201ENST00000288344 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 IGSF22Q8N9C0 903 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 FAM184AQ8NB25 1140 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 PBX4Q9BYU1 374 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 CELF4Q9BZC1 486 aaKnown RBP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 NRBP2Q9NSY0 501 aa10.3□□□□□ -0.76
HMGN1-201ENST00000288344 YBX2Q9Y2T7 364 aaKnown RBP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-201ENST00000288344 COL4A6Q14031 1691 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 ENPP3O14638 875 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 MAGEB2O15479 319 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 CHMP2AO43633 222 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 NEMFO60524 1076 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 ARHGEF15O94989 841 aa10.29□□□□□ -0.76
HMGN1-201ENST00000288344 RPLP2P05387 115 aaKnown RBP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 XRCC6P12956 609 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGN1-201ENST00000288344 MCM7P33993 719 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms