RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RPS6KA2Q15349 733 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ATP2B3Q16720 1220 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ATAT1Q5SQI0 421 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 GJC2Q5T442 439 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 THEMIS2Q5TEJ8 643 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 EEF1DP3Q658K8 133 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 LDHAL6AQ6ZMR3 332 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ESPNLQ6ZVH7 1005 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 MPNDQ8N594 471 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 DDX11Q96FC9 970 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 RCC1LQ96I51 464 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 ZFYVE21Q9BQ24 234 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 GPR27Q9NS67 375 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 CLEC1BQ9P126 229 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 KCNH3Q9ULD8 1083 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ABCC3O15438 1527 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 NCOA1Q15788 1441 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CCDC196A0A1B0GTZ2 297 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 C2orf71A6NGG8 1288 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 BPIP17213 487 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ALAS2P22557 587 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 RXRBP28702 533 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PPARGP37231 505 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 MSH2P43246 934 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 HTRA3P83110 453 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 UBXN1Q04323 297 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 UGT8Q16880 541 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CCDC158Q5M9N0 1113 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 WDR45BQ5MNZ6 344 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TRIM68Q6AZZ1 485 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 LRFN4Q6PJG9 635 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 OR2C3Q8N628 320 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 KLHL23Q8NBE8 558 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PCSK9Q8NBP7 692 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 HPS3Q969F9 1004 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CENPOQ9BU64 300 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 YIPF2Q9BWQ6 316 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 NAA15Q9BXJ9 866 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 WNT10AQ9GZT5 417 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 QRSL1Q9H0R6 528 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 CLDND1Q9NY35 253 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 USP36Q9P275 1121 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 TMEM5Q9Y2B1 443 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ARHGAP23Q9P227 1491 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 NOS1P29475 1434 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 POTECB2RU33 542 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 APOL1O14791 398 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 FFAR2O15552 330 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ITGA2BP08514 1039 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 RXRAP19793 462 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 GPR85P60893 370 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 KRT32Q14532 448 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 FDX2Q6P4F2 183 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TRIM59Q8IWR1 403 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 RHOT1Q8IXI2 618 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 THEMISQ8N1K5 641 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 PCDH19Q8TAB3 1148 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 KLRG1Q96E93 195 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 JPH1Q9HDC5 661 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 SLC13A4Q9UKG4 626 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 MKL2Q9ULH7 1088 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 COA3Q9Y2R0 106 aaPredicted RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 SLC45A1Q9Y2W3 748 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 DYRK1BQ9Y463 629 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PCDHGB3Q9Y5G1 929 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TMEM131LA2VDJ0 1609 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ITIH6Q6UXX5 1313 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 A0A087WZG4 1122 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PIP5K1BO14986 540 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 NPHS1O60500 1241 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 MYL4P12829 197 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PAMP19021 973 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CD40P25942 277 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 ZNF131P52739 623 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 GFRA1P56159 465 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TMF1P82094 1093 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 FSCN1Q16658 493 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 CT83Q5H943 113 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 MEX3CQ5U5Q3 659 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 LVRNQ6Q4G3 990 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 KRT77Q7Z794 578 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CMTR2Q8IYT2 770 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 FAM26EQ8N5C1 309 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 IL22RA1Q8N6P7 574 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TRAPPC12Q8WVT3 735 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 SSH1Q8WYL5 1049 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 TBC1D20Q96BZ9 403 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 CDADC1Q9BWV3 514 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 JMJD4Q9H9V9 463 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 LMBRD1Q9NUN5 540 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 IPPQ9Y573 584 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 IQSEC2Q5JU85 1478 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 NDUFS2O75306 463 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 POU2F2P09086 479 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 AKAP5P24588 427 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 SERPINB3P29508 390 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 PGM1P36871 562 aa3.1□□□□□ -1.91
CHD1-201ENST00000284049 RARSP54136 660 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ATXN1P54253 815 aaKnown RBP3.1□□□□□ -1.91
CHD1-201ENST00000284049 ZNF445P59923 1031 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms