RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC50Q8IVM0 306 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 HDAC7Q8WUI4 952 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 DONSONQ9NYP3 566 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ARHGAP20Q9P2F6 1191 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 PCDHA4Q9UN74 947 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 STX8Q9UNK0 236 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 COBLO75128 1261 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 FLOT1O75955 427 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 FAM107AO95990 144 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 MCM7P33993 719 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 FCGRTP55899 365 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 COG2Q14746 738 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 ARHGEF6Q15052 776 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC96Q2M329 555 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC181Q5TID7 509 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 CENPPQ6IPU0 288 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 ZNF473Q8WTR7 871 aaKnown RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 TLR10Q9BXR5 811 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 FBXO28Q9NVF7 368 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 BTBD7Q9P203 1132 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 RABGAP1Q9Y3P9 1069 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 CAPN7Q9Y6W3 813 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 MACROD2A1Z1Q3 448 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 BTNL10A8MVZ5 291 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 RASSF9O75901 435 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 DSG3P32926 999 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 KIF5BP33176 963 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 MDH1P40925 334 aaKnown RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 PREPLQ4J6C6 727 aaPredicted RBP11.31□□□□□ -0.6
UPF3B-201ENST00000276201 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 FBXW10Q5XX13 1052 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 TFR2Q9UP52 801 aa11.31□□□□□ -0.6
UPF3B-201ENST00000276201 HTTP42858 3142 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 GNRH1P01148 92 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 PAEPP09466 180 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 NR1D1P20393 614 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 AMPD3Q01432 767 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 PDCLQ13371 301 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 MAN2A1Q16706 1144 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 Q3C1V9 767 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 KLHDC7AQ5VTJ3 777 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 LUC7LQ9NQ29 371 aaKnown RBP11.3□□□□□ -0.6
UPF3B-201ENST00000276201 HOXC10Q9NYD6 342 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 C5orf60A6NFR6 353 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 MOCS3O95396 460 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
UPF3B-201ENST00000276201 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
UPF3B-201ENST00000276201 SLFN13Q68D06 897 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
UPF3B-201ENST00000276201 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 MYCBPAPQ8TBZ2 947 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 BAP1Q92560 729 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 RNPC3Q96LT9 517 aaKnown RBP11.3□□□□□ -0.6
UPF3B-201ENST00000276201 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 TMBIM4Q9HC24 238 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 SRRDQ9UH36 339 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 PTCH2Q9Y6C5 1203 aa11.3□□□□□ -0.6
UPF3B-201ENST00000276201 PVALEFA0A1B0GWK0 134 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
UPF3B-201ENST00000276201 UBA7P41226 1012 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 MAGEA1P43355 309 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 GNAQP50148 359 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 PRKCZQ05513 592 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 ITGB3BPQ13352 177 aaPredicted RBP11.29□□□□□ -0.6
UPF3B-201ENST00000276201 LACTB2Q53H82 288 aaPredicted RBP11.29□□□□□ -0.6
UPF3B-201ENST00000276201 NFRKBQ6P4R8 1299 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 PDXDC1Q6P996 788 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 GMCL1Q96IK5 515 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
UPF3B-201ENST00000276201 PORCNQ9H237 461 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms