RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 KCNK18Q7Z418 384 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CCDC50Q8IVM0 306 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 TBC1D31Q96DN5 1066 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CCDC17Q96LX7 622 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 RIC8AQ9NPQ8 531 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 RNASE9P60153 205 aaKnown RBP17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 CUL5Q93034 780 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 BLOC1S4Q9NUP1 217 aa17.41■□□□□ 0.38
MAP1LC3B-201ENST00000268607 A0A1W2PQJ5 194 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 HMGB1P1B2RPK0 211 aaPredicted RBP17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 BACH1O14867 736 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MAGEA1P43355 309 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ECM1Q16610 540 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 USH1GQ495M9 461 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MAGEC3Q8TD91 643 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SNX29Q8TEQ0 813 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 KRT12Q99456 494 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GGA2Q9UJY4 613 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 ZBTB21Q9ULJ3 1066 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 PCDHA1Q9Y5I3 950 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MYMKA6NI61 221 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DRP2Q13474 957 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 QPCTQ16769 361 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 MTMR14Q8NCE2 650 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 NOC3LQ8WTT2 800 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 SPATS2LQ9NUQ6 558 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 FBXO28Q9NVF7 368 aa17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 DDX25Q9UHL0 483 aaKnown RBP17.4■□□□□ 0.38
MAP1LC3B-201ENST00000268607 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SV2BQ7L1I2 683 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MREGQ8N565 214 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TATDN2Q93075 761 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 P2RX5Q93086 422 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ERGIC2Q96RQ1 377 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ACTR5Q9H9F9 607 aaPredicted RBP17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SLC8A1P32418 973 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 AP1ARQ63HQ0 302 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 KIAA0895Q8NCT3 520 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HAS1Q92839 578 aa17.39■□□□□ 0.37
MAP1LC3B-201ENST00000268607 GMNCA6NCL1 334 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TMOD1P28289 359 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FIGNQ5HY92 759 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 GPC2Q8N158 579 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 GLIS3Q8NEA6 775 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 THOC1Q96FV9 657 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 DHTKD1Q96HY7 919 aaPredicted RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 C7orf25Q9BPX7 421 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 TMBIM4Q9HC24 238 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 LRRC53A6NM62 1247 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 HNRNPH3P31942 346 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CAP2P40123 477 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SLC8A3P57103 927 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 LRRC41Q15345 812 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ANKRD20A8PQ5CZ79 823 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RRAGAQ7L523 313 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PARD3BQ8TEW8 1205 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 LARP4BQ92615 738 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 RSRC1Q96IZ7 334 aaKnown RBP17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
MAP1LC3B-201ENST00000268607 GOLGA6L10A6NI86 522 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 LCA5LO95447 670 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CCNE1P24864 410 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FAM83AQ86UY5 434 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ZNF341Q9BYN7 854 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CUEDC2Q9H467 287 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PACSIN2Q9UNF0 486 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ENO4A6NNW6 628 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 PHF20L1A8MW92 1017 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 FTCDO95954 541 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 AMPD3Q01432 767 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 KCTD19Q17RG1 926 aaPredicted RBP17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 KRT79Q5XKE5 535 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 CCDC47Q96A33 483 aaKnown RBP17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 SH3GL3Q99963 347 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 BRCA2P51587 3418 aa17.37■□□□□ 0.37
MAP1LC3B-201ENST00000268607 ANKRD33BA6NCL7 494 aa17.36■□□□□ 0.37
MAP1LC3B-201ENST00000268607 AP1G2O75843 785 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms