RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 NPEPPSP55786 919 aa22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 ZC2HC1CQ53FD0 456 aaPredicted RBP22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 ANKRD13CQ8N6S4 541 aa22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 NDST4Q9H3R1 872 aa22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 LARSQ9P2J5 1176 aaKnown RBP22.65■■□□□ 1.22
LYSMD2-201ENST00000267838 STX10O60499 249 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 TGFB3P10600 412 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 MARSP56192 900 aaKnown RBP22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 KCNA1Q09470 495 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 EEPD1Q7L9B9 569 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 ERGIC2Q96RQ1 377 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 PCDHB13Q9Y5F0 798 aa22.64■■□□□ 1.22
LYSMD2-201ENST00000267838 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.21
LYSMD2-201ENST00000267838 ARID2Q68CP9 1835 aa22.64■■□□□ 1.21
LYSMD2-201ENST00000267838 SYNGAP1Q96PV0 1343 aa22.64■■□□□ 1.21
LYSMD2-201ENST00000267838 IGSF9BQ9UPX0 1349 aa22.64■■□□□ 1.21
LYSMD2-201ENST00000267838 MAPTP10636 758 aaKnown RBP22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 NEDD9Q14511 834 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 CHADLQ6NUI6 762 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 CCDC51Q96ER9 411 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 ERO1AQ96HE7 468 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 DRC1Q96MC2 740 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 MORF4L1Q9UBU8 362 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 ZMYM2Q9UBW7 1377 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 LOC102724159A0A0B4J2E5 919 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 ARHGAP6O43182 974 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 FARP2O94887 1054 aaPredicted RBP22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 PLS3P13797 630 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 PRKCEQ02156 737 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 PWP2Q15269 919 aaKnown RBP22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 MORC4Q8TE76 937 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 CEP170P1Q96L14 293 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 STRA6Q9BX79 667 aa22.63■■□□□ 1.21
LYSMD2-201ENST00000267838 MYH9P35579 1960 aaKnown RBP22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 TGFB1I1O43294 461 aa22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 RPL13P26373 211 aaKnown RBP22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 HUNKP57058 714 aa22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 E4F1Q66K89 784 aaPredicted RBP22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 PTPN18Q99952 460 aa22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 ZNF302Q9NR11 478 aa22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 PLXNB2O15031 1838 aa22.62■■□□□ 1.21
LYSMD2-201ENST00000267838 K7ENM7 598 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 PPP1R37O75864 691 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 NR3C1P04150 777 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 KCNV1Q6PIU1 500 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 KSR1Q8IVT5 923 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 PARK7Q99497 189 aaKnown RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 NUP58Q9BVL2 599 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 SEPT9Q9UHD8 586 aaPredicted RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 MAFBQ9Y5Q3 323 aaPredicted RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 RNF225M0QZC1 329 aaPredicted RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 ALCAMQ13740 583 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 NFIL3Q16649 462 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 XKR3Q5GH77 459 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 FAM102BQ5T8I3 360 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 TRIM59Q8IWR1 403 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 NAA15Q9BXJ9 866 aaKnown RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 GPRC5CQ9NQ84 441 aa22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 TRMT1Q9NXH9 659 aaKnown RBP22.61■■□□□ 1.21
LYSMD2-201ENST00000267838 IGKV6D-21A0A0A0MT36 114 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 TTC26A0AVF1 554 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 ASB14A6NK59 587 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 CLIC2O15247 247 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 GGPS1O95749 300 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 KLK7P49862 253 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 LY6KQ17RY6 165 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 METTL7BQ6UX53 244 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 RETREG2Q8NC44 543 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 PCMTD1Q96MG8 357 aaPredicted RBP22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 ABHD10Q9NUJ1 306 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 OGFRQ9NZT2 677 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 DDX41Q9UJV9 622 aaKnown RBP22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 CAPN11Q9UMQ6 739 aa22.6■■□□□ 1.21
LYSMD2-201ENST00000267838 GSTTP1A0A1W2PQM5 241 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 ARIH2O95376 493 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 SLU7O95391 586 aaKnown RBP22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 KRT9P35527 623 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 FRMD5Q7Z6J6 570 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 PPP1R13BQ96KQ4 1090 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 TTYH3Q9C0H2 523 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 CYP26B1Q9NR63 512 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 PLXNA1Q9UIW2 1896 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 MCM3APO60318 1980 aa22.59■■□□□ 1.21
LYSMD2-201ENST00000267838 RASSF10A6NK89 507 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 SLC16A3O15427 465 aaKnown RBP22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 DGAT1O75907 488 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 TRIM21P19474 475 aaKnown RBP22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 ATP4AP20648 1035 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 FECHP22830 423 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 ADORA2AP29274 412 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 CBX1P83916 185 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 ZNF792Q3KQV3 632 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 HS2ST1Q7LGA3 356 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 FBXO16Q8IX29 292 aaPredicted RBP22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 ABRAQ8N0Z2 381 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 ZNF397Q8NF99 534 aaPredicted RBP22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 GBP3Q9H0R5 595 aa22.58■■□□□ 1.21
LYSMD2-201ENST00000267838 IKZF4Q9H2S9 585 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms