RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 GAS7O60861 476 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 KRT18P05783 430 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 PSMC2P35998 433 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 MRPS9P82933 396 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 RASSF7Q02833 373 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 ITGB3BPQ13352 177 aaPredicted RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 EIF1ADQ8N9N8 165 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 EXOC4Q96A65 974 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 CFBP00751 764 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 KLRC1P26715 233 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 MCF2L2Q86YR7 1114 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 CAVIN3Q969G5 261 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 LXNQ9BS40 222 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 TANGO6Q9C0B7 1094 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 GDF3Q9NR23 364 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 SYF2O95926 243 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 FDX1P10109 184 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 ACTN1P12814 892 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 RAD51AP2Q09MP3 1159 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 NNTQ13423 1086 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 NFRKBQ6P4R8 1299 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 NLRC4Q9NPP4 1024 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 LUC7LQ9NQ29 371 aaKnown RBP12.22□□□□□ -0.45
MSH3-201ENST00000265081 NAGPAQ9UK23 515 aa12.22□□□□□ -0.45
MSH3-201ENST00000265081 ZBTB39O15060 712 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 CTNND1O60716 968 aaKnown RBP12.21□□□□□ -0.45
MSH3-201ENST00000265081 GCNT3O95395 438 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 MYBL2P10244 700 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 HADHBP55084 474 aaKnown RBP12.21□□□□□ -0.45
MSH3-201ENST00000265081 NCKAP1LP55160 1127 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 SPP2Q13103 211 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 IKQ13123 557 aaPredicted RBP12.21□□□□□ -0.45
MSH3-201ENST00000265081 TKFCQ3LXA3 575 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
MSH3-201ENST00000265081 P4HA2O15460 535 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 RPS6KA5O75582 802 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 NMT1P30419 496 aaKnown RBP12.21□□□□□ -0.46
MSH3-201ENST00000265081 ZNF76P36508 570 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 XRRA1Q6P2D8 792 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 C12orf42Q96LP6 360 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 FBXO28Q9NVF7 368 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.46
MSH3-201ENST00000265081 FMO5P49326 533 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 GTF2BQ00403 316 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 KLHL30Q0D2K2 578 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 MAP9Q49MG5 647 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 NIM1KQ8IY84 436 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 IL31RAQ8NI17 732 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 AGBL1Q96MI9 1066 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 UIMC1Q96RL1 719 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 SH3GL2Q99962 352 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 STK33Q9BYT3 514 aa12.21□□□□□ -0.46
MSH3-201ENST00000265081 F8VZ95 297 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 RAD21O60216 631 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 C2orf54Q08AI8 447 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 KIF22Q14807 665 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 FMNL3Q8IVF7 1028 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
MSH3-201ENST00000265081 PPP1R9AQ9ULJ8 1098 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 TTC7AQ9ULT0 858 aaPredicted RBP12.2□□□□□ -0.46
MSH3-201ENST00000265081 FAM13AO94988 1023 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 C4orf19Q8IY42 314 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 PACSIN1Q9BY11 444 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 AGPSO00116 658 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 NFIBO00712 420 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 PALMO75781 387 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 PGM5Q15124 567 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 STXBP4Q6ZWJ1 553 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 TPH2Q8IWU9 490 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 FAM186BQ8IYM0 893 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 ACTRT1Q8TDG2 376 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 PDE11AQ9HCR9 933 aa12.2□□□□□ -0.46
MSH3-201ENST00000265081 EIF3JO75822 258 aaKnown RBP12.19□□□□□ -0.46
MSH3-201ENST00000265081 STBD1O95210 358 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 FERP16591 822 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 COG2Q14746 738 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 ZC2HC1CQ53FD0 456 aaPredicted RBP12.19□□□□□ -0.46
MSH3-201ENST00000265081 MREGQ8N565 214 aa12.19□□□□□ -0.46
MSH3-201ENST00000265081 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
MSH3-201ENST00000265081 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms