RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CYP3A4P08684 503 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 EIF2AK2P19525 551 aaKnown RBP17.72■□□□□ 0.43
CTCF-201ENST00000264010 LMNB1P20700 586 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 CAP2P40123 477 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 FAM102BQ5T8I3 360 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 PADI6Q6TGC4 694 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 ZNF662Q6ZS27 426 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 ETNPPLQ8TBG4 499 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 TMOD4Q9NZQ9 345 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 TARSL2A2RTX5 802 aaKnown RBP17.71■□□□□ 0.43
CTCF-201ENST00000264010 PALMO75781 387 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 GFPT2O94808 682 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 OTUD6AQ7L8S5 288 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.43
CTCF-201ENST00000264010 FAM76AQ8TAV0 307 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 BCAS4Q8TDM0 211 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 RAVER2Q9HCJ3 691 aaKnown RBP17.71■□□□□ 0.43
CTCF-201ENST00000264010 FBXO28Q9NVF7 368 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 KCND2Q9NZV8 630 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 BAIAP2L1Q9UHR4 511 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 RSPH10B2B2RC85 870 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 ZNF185O15231 689 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 EIF3DO15371 548 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTCF-201ENST00000264010 ABL1P00519 1130 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 RSPH10BP0C881 870 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 POTEJP0CG39 1038 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 DPEP1P16444 411 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 PLA2G4AP47712 749 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 RASA3Q14644 834 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 KLHL7Q8IXQ5 586 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 IRAK4Q9NWZ3 460 aa17.71■□□□□ 0.43
CTCF-201ENST00000264010 CFAP58Q5T655 872 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 RSRC1Q96IZ7 334 aaKnown RBP17.7■□□□□ 0.42
CTCF-201ENST00000264010 PNKPQ96T60 521 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 RIT2Q99578 217 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 MYH1P12882 1939 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 A0A1W2PRG0 241 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 UCHL3P15374 230 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 HNRNPH3P31942 346 aaKnown RBP17.7■□□□□ 0.42
CTCF-201ENST00000264010 CCDC121Q6ZUS5 278 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 LPAR1Q92633 364 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 TTYH3Q9C0H2 523 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 TBC1D22BQ9NU19 505 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
CTCF-201ENST00000264010 ZRANB2O95218 330 aaKnown RBP eCLIP17.7■□□□□ 0.42
CTCF-201ENST00000264010 ACTN1P12814 892 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 SLC9A1P19634 815 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 MTMR1Q13613 665 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 DAAM2Q86T65 1068 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 SLC17A8Q8NDX2 589 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 IFT74Q96LB3 600 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 MXRA8Q9BRK3 442 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 ANKZF1Q9H8Y5 726 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 TRAF3IP3Q9Y228 551 aa17.7■□□□□ 0.42
CTCF-201ENST00000264010 ECM29Q5VYK3 1845 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 NCK2O43639 380 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 CCDC26Q8TAB7 109 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 VTI1AQ96AJ9 217 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 MUTP22033 750 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 FAM83AQ86UY5 434 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 EPHB6O15197 1021 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 ZFYVE27Q5T4F4 411 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 NAP1L3Q99457 506 aaPredicted RBP17.69■□□□□ 0.42
CTCF-201ENST00000264010 PCIF1Q9H4Z3 704 aa17.69■□□□□ 0.42
CTCF-201ENST00000264010 ABCB4P21439 1286 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 QARSP47897 775 aaKnown RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 SPATA4Q8NEY3 305 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 TBC1D31Q96DN5 1066 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 DNAJC12Q9UKB3 198 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 RAB21Q9UL25 225 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 EIF4E1BA6NMX2 242 aaKnown RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 HIP1RO75146 1068 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 HPDP32754 393 aaPredicted RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 CEP85LQ5SZL2 805 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 KLHDC7AQ5VTJ3 777 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 RNF207Q6ZRF8 634 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 CALR3Q96L12 384 aaKnown RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 MBOAT7Q96N66 472 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 RMDN3Q96TC7 470 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 PAIP2Q9BPZ3 127 aaKnown RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 CAPN6Q9Y6Q1 641 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 EML1O00423 815 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 VIL1P09327 827 aaKnown RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 CYP2C19P33261 490 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
CTCF-201ENST00000264010 PSMD1Q99460 953 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 UBE4BO95155 1302 aa17.68■□□□□ 0.42
CTCF-201ENST00000264010 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms