RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CALB1P05937 261 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 TRIML2Q8N7C3 387 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 TMPRSS15P98073 1019 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 FAF2Q96CS3 445 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 SOX5P35711 763 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 KIAA1841Q6NSI8 718 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 ING2Q9H160 280 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 ABCB6Q9NP58 842 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 MYO9BQ13459 2157 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 MEIS1O00470 390 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 PALMO75781 387 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 HSPA4LO95757 839 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 RESTQ13127 1097 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 PDXDC2PQ6P474 469 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 BBOX1O75936 387 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 SLFNL1Q499Z3 407 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 ANAPC7Q9UJX3 599 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 MAGED2Q9UNF1 606 aaPredicted RBP18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 KCNQ3O43525 872 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 CREB3O43889 395 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 SEMA3FQ13275 785 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 ERICH1Q86X53 443 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 GCNAQ96QF7 691 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 UGGT1Q9NYU2 1555 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 GTPBP10A4D1E9 387 aaKnown RBP18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
NOTCH3-201ENST00000263388 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 ARHGEF6Q15052 776 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 TADA2BQ86TJ2 420 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 KIAA1586Q9HCI6 787 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 LMCD1Q9NZU5 365 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 CFLARO15519 480 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 L3MBTL1Q9Y468 752 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 JAK3P52333 1124 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 DRP2Q13474 957 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 CDV3Q9UKY7 258 aaKnown RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 KRT4P19013 534 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 KRT8P05787 483 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 TRIP13Q15645 432 aaPredicted RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 USP17L2Q6R6M4 530 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 ZRANB2O95218 330 aaKnown RBP eCLIP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 PAPOLAP51003 745 aaKnown RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 CCDC92Q53HC0 331 aaPredicted RBP18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 TEDDM1Q5T9Z0 273 aa18.67■□□□□ 0.58
NOTCH3-201ENST00000263388 PCDHB6Q9Y5E3 794 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 GRID2IPA4D2P6 1211 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 STOML1Q9UBI4 398 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 SUFUQ9UMX1 484 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 KLHL38Q2WGJ6 581 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 BEND6Q5SZJ8 279 aaPredicted RBP18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 CAPN11Q9UMQ6 739 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 KPNA7A9QM74 516 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 CD58P19256 250 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 FAM160B2Q86V87 743 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 MSTO1Q9BUK6 570 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 A0A0G2JND7 137 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 A0A1B0GW55 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 TMCC1O94876 653 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 SERPINB2P05120 415 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 MAGEB5Q9BZ81 275 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 NEUROG2Q9H2A3 272 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 NDE1Q9NXR1 346 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 DUX4Q9UBX2 424 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 LGALS16A8MUM7 142 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 BBS9Q3SYG4 887 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 CYTH2Q99418 400 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 ZFP69BQ9UJL9 534 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
NOTCH3-201ENST00000263388 EPHB1P54762 984 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 HDAC4P56524 1084 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 COPS2P61201 443 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 NOP9Q86U38 636 aaKnown RBP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 PIGSQ96S52 555 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ADAMTS1Q9UHI8 967 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 LRFN2Q9ULH4 789 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 WDR19Q8NEZ3 1342 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 CCDC159P0C7I6 412 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 CNPY4Q8N129 248 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 FTOQ9C0B1 505 aaKnown RBP eCLIP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ARAP3Q8WWN8 1544 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ANGPTL8Q6UXH0 198 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 SAYSD1Q9NPB0 183 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 PPARGC1AQ9UBK2 798 aaKnown RBP18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ADAM21Q9UKJ8 722 aa18.65■□□□□ 0.58
NOTCH3-201ENST00000263388 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms