RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 ALCAMQ13740 583 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 FAM102BQ5T8I3 360 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 MAEAQ7L5Y9 396 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 PLPPR4Q7Z2D5 763 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 ZNF720Q7Z2F6 126 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 SLC17A8Q8NDX2 589 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 KIFAP3Q92845 792 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 IMPACTQ9P2X3 320 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 PRPF6O94906 941 aaKnown RBP14.36□□□□□ -0.11
VAMP7-201ENST00000262640 NMT1P30419 496 aaKnown RBP14.36□□□□□ -0.11
VAMP7-201ENST00000262640 ADCYAP1R1P41586 468 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 FKBP3Q00688 224 aaKnown RBP14.36□□□□□ -0.11
VAMP7-201ENST00000262640 NR1I3Q14994 352 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 EDRF1Q3B7T1 1238 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 MTERF2Q49AM1 385 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 OLFML2BQ68BL8 750 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 GLG1Q92896 1179 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 APBA2Q99767 749 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 PDLIM7Q9NR12 457 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 INTS13Q9NVM9 706 aa14.36□□□□□ -0.11
VAMP7-201ENST00000262640 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 PDXKO00764 312 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 AOC2O75106 756 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 SLC26A2P50443 739 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 COPB1P53618 953 aaKnown RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 TMEM63BQ5T3F8 832 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 LRRC55Q6ZSA7 311 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 VSTM4Q8IW00 320 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 ZNF784Q8NCA9 323 aaPredicted RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 CNOT6LQ96LI5 555 aaKnown RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 CEP63Q96MT8 703 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 C17orf75Q9HAS0 396 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 GJD2Q9UKL4 321 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 TRAF3IP3Q9Y228 551 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 CALUO43852 315 aaPredicted RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 YY1P25490 414 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 HOXD13P35453 343 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 RFC5P40937 340 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 DUSP28Q4G0W2 176 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 TMC6Q7Z403 805 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 ZC3H3Q8IXZ2 948 aaKnown RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 STRA6Q9BX79 667 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 SMARCAD1Q9H4L7 1026 aa14.35□□□□□ -0.11
VAMP7-201ENST00000262640 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 TYW1Q9NV66 732 aaKnown RBP14.35□□□□□ -0.11
VAMP7-201ENST00000262640 K7ENM7 598 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 TPM2P07951 284 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 POLGP54098 1239 aaPredicted RBP14.34□□□□□ -0.11
VAMP7-201ENST00000262640 FCGRTP55899 365 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 RTP1P59025 263 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 PPTC7Q8NI37 304 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 BBXQ8WY36 941 aaPredicted RBP14.34□□□□□ -0.11
VAMP7-201ENST00000262640 ST6GALNAC4Q9H4F1 302 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 GPRC5CQ9NQ84 441 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 TAB2Q9NYJ8 693 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 N4BP3O15049 544 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 PPP1R37O75864 691 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 EMC2Q15006 297 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
VAMP7-201ENST00000262640 CCDC186Q7Z3E2 898 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 ATP8B4Q8TF62 1192 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 XPNPEP1Q9NQW7 623 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 NRBP1Q9UHY1 535 aa14.34□□□□□ -0.11
VAMP7-201ENST00000262640 ARID2Q68CP9 1835 aa14.33□□□□□ -0.11
VAMP7-201ENST00000262640 GNA14O95837 355 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 CYP2B6P20813 491 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 MTIF2P46199 727 aaKnown RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 SMTNP53814 917 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 NCKAP1LP55160 1127 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 GSDMDP57764 484 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 DMP1Q13316 513 aaPredicted RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 FILIP1Q7Z7B0 1213 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 VPS16Q9H269 839 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 DHX33Q9H6R0 707 aaKnown RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 FLRT1Q9NZU1 646 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 KCNG1Q9UIX4 513 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 MYH9P35579 1960 aaKnown RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 SMPD1P17405 629 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 PEX3P56589 373 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
VAMP7-201ENST00000262640 TRIM50Q86XT4 487 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 SLC7A3Q8WY07 619 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 EEF2KMTQ96G04 330 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 TUBGCP2Q9BSJ2 902 aa14.33□□□□□ -0.12
VAMP7-201ENST00000262640 CETN3O15182 167 aa14.32□□□□□ -0.12
VAMP7-201ENST00000262640 PTGS1P23219 599 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms