RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 DNAJC12Q9UKB3 198 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 MYO3BQ8WXR4 1341 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 PSMD14O00487 310 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 GAS2L3Q86XJ1 694 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 MMTAG2Q9BU76 263 aaKnown RBP13.07□□□□□ -0.32
SPG11-201ENST00000261866 hCG_1984214I3L0E3 225 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 RESTQ13127 1097 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 ZNF713Q8N859 430 aaPredicted RBP13.07□□□□□ -0.32
SPG11-201ENST00000261866 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 LXNQ9BS40 222 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 NDST4Q9H3R1 872 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 GGA3Q9NZ52 723 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 ZBED1O96006 694 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 PLS3P13797 630 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 SLC9A5Q14940 896 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TBC1D16Q8TBP0 767 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 HOXD10P28358 340 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TSPY1Q01534 308 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
SPG11-201ENST00000261866 CFAP61Q8NHU2 1237 aa13.07□□□□□ -0.32
SPG11-201ENST00000261866 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
SPG11-201ENST00000261866 VGLL3A8MV65 326 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 PSMC5P62195 406 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 FOXO4P98177 505 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 ZNF449Q6P9G9 518 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 FASTKD5Q7L8L6 764 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 PCGF5Q86SE9 256 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 HMBSP08397 361 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 TXNP10599 105 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 PFKFB3Q16875 520 aaPredicted RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 FGD4Q96M96 766 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 LY9Q9HBG7 655 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 DAAM1Q9Y4D1 1078 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 CELF2O95319 508 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 MYL1P05976 194 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 IRF1P10914 325 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 HPS3Q969F9 1004 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 VCXQ9H320 206 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 BAG5Q9UL15 447 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 DPEP1P16444 411 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 ARHGAP24Q8N264 748 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 RAD54LQ92698 747 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 OVOS2A0A0J9YW53 1432 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 OVOS2Q6IE36 1432 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 RNF10Q8N5U6 811 aaKnown RBP13.06□□□□□ -0.32
SPG11-201ENST00000261866 TRIM11Q96F44 468 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 TLK1Q9UKI8 766 aa13.06□□□□□ -0.32
SPG11-201ENST00000261866 SHROOM2Q13796 1616 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 COG7P83436 770 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 COASYQ13057 564 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 ARID5BQ14865 1188 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 KRT31Q15323 416 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 SP8Q8IXZ3 490 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 TMEM143Q96AN5 459 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 LRGUKQ96M69 825 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
SPG11-201ENST00000261866 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
SPG11-201ENST00000261866 SERPING1P05155 500 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 SLFN12LQ6IEE8 588 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 ACSL3O95573 720 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 NR3C1P04150 777 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 CCNE1P24864 410 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 IFT43Q96FT9 208 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
SPG11-201ENST00000261866 HOMER3Q9NSC5 361 aa13.05□□□□□ -0.32
SPG11-201ENST00000261866 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms