RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ASB14A6NK59 587 aa20.77■□□□□ 0.92
COL4A3BP-201ENST00000261415 RNF40O75150 1001 aa20.77■□□□□ 0.92
COL4A3BP-201ENST00000261415 DPP9Q86TI2 863 aa20.77■□□□□ 0.92
COL4A3BP-201ENST00000261415 CATSPER3Q86XQ3 398 aa20.77■□□□□ 0.92
COL4A3BP-201ENST00000261415 BLOC1S4Q9NUP1 217 aa20.77■□□□□ 0.92
COL4A3BP-201ENST00000261415 PHACTR2O75167 634 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 SPATA31C1P0DKV0 1188 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 EEPD1Q7L9B9 569 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 MAGEF1Q9HAY2 307 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 NEBLO76041 1014 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 CYP4A11Q02928 519 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 ZKSCAN8Q15776 578 aaPredicted RBP20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 KCNK18Q7Z418 384 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 POLR3CQ9BUI4 534 aaPredicted RBP20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 KBTBD4Q9NVX7 518 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 TUBE1Q9UJT0 475 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 KIAA1024Q9UPX6 916 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 NFASCO94856 1347 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 ARID2Q68CP9 1835 aa20.76■□□□□ 0.91
COL4A3BP-201ENST00000261415 POTEFA5A3E0 1075 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 HTRA3P83110 453 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 FANCCQ00597 558 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 PREPLQ4J6C6 727 aaPredicted RBP20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 MORN1Q5T089 497 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 POTEGQ6S5H5 508 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 ARMCX2Q7L311 632 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 MIER3Q7Z3K6 550 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 HSD17B14Q9BPX1 270 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 RGL1Q9NZL6 768 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 DIS3Q9Y2L1 958 aaKnown RBP20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 PCDHA5Q9Y5H7 936 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 MYH11P35749 1972 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 CASP1P29466 404 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 KRT76Q01546 638 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 SP2Q02086 613 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 EPHA7Q15375 998 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 LARP4BQ92615 738 aaKnown RBP20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 RAD54LQ92698 747 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 TUFT1Q9NNX1 390 aa20.75■□□□□ 0.91
COL4A3BP-201ENST00000261415 CASP8AP2Q9UKL3 1982 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 IKBKBO14920 756 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 CCNE2O96020 404 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 VEGFBP49765 207 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 FBXO16Q8IX29 292 aaPredicted RBP20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 N4BP2L2Q92802 583 aaPredicted RBP20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 DYDC2Q96IM9 177 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 MAML3Q96JK9 1138 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 BCAS3Q9H6U6 928 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 TCEAL9Q9UHQ7 104 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 STX10O60499 249 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 SLITRK3O94933 977 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 CCT5P48643 541 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 DPYDQ12882 1025 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 SPATS2Q86XZ4 545 aaKnown RBP20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 PNKPQ96T60 521 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 SENP7Q9BQF6 1050 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 JPH1Q9HDC5 661 aaPredicted RBP20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 CDC23Q9UJX2 597 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
COL4A3BP-201ENST00000261415 A0A087WWV3 80 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 GTPBP6O43824 516 aaPredicted RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 PRPF6O94906 941 aaKnown RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 MAP2K5Q13163 448 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 CUL4BQ13620 913 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 CTTNQ14247 550 aaKnown RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 NT5DC1Q5TFE4 455 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 ZNF746Q6NUN9 644 aaPredicted RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 SPATA20Q8TB22 786 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 NEK9Q8TD19 979 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 TRIM6Q9C030 488 aaPredicted RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 BLZF1Q9H2G9 400 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 WDR64B1ANS9 1081 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 E9PMD0 336 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 BIN1O00499 593 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 TGFB3P10600 412 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 SFNP31947 248 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 MAMDC4Q6UXC1 1216 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 SLC5A4Q9NY91 659 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 SLC9A2Q9UBY0 812 aa20.73■□□□□ 0.91
COL4A3BP-201ENST00000261415 TNPO2O14787 897 aaKnown RBP20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 CTGFP29279 349 aa20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 JAK3P52333 1124 aa20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 SV2BQ7L1I2 683 aa20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 TPH2Q8IWU9 490 aa20.72■□□□□ 0.91
COL4A3BP-201ENST00000261415 MYL1P05976 194 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 LXNQ9BS40 222 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 ODF2LQ9ULJ1 636 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 ANKRD33BA6NCL7 494 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 SORBS3O60504 671 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 FSBPO95073 299 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 MUTP22033 750 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 UBASH3AP57075 661 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 PSMC6P62333 389 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 WLSQ5T9L3 541 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 CYFIP1Q7L576 1253 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 TMEM139Q8IV31 216 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms