RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PAK2Q13177 524 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 ARNTL2Q8WYA1 636 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 OSMRQ99650 979 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 TMX1Q9H3N1 280 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 SUGCTQ9HAC7 445 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 RGL1Q9NZL6 768 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 AKT3Q9Y243 479 aa25.77■■□□□ 1.72
LSM4-201ENST00000252816 LINC01553A4QN01 128 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 TMOD1P28289 359 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 MCM7P33993 719 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 CRYBB1P53674 252 aaPredicted RBP25.76■■□□□ 1.71
LSM4-201ENST00000252816 DRP2Q13474 957 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 PLA2G4FQ68DD2 849 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 MAP7D2Q96T17 732 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 ERVK-5Q9HDB9 667 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 PCDHA12Q9UN75 941 aa25.76■■□□□ 1.71
LSM4-201ENST00000252816 IGFBP4P22692 258 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 TXKP42681 527 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 MCM2P49736 904 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 NLRP11P59045 1033 aaKnown RBP25.75■■□□□ 1.71
LSM4-201ENST00000252816 NOSTRINQ8IVI9 506 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 SP7Q8TDD2 431 aaPredicted RBP25.75■■□□□ 1.71
LSM4-201ENST00000252816 DYDC2Q96IM9 177 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 LXNQ9BS40 222 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 FTHL17Q9BXU8 183 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 ADAMTS10Q9H324 1103 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 TTC12Q9H892 705 aaPredicted RBP25.75■■□□□ 1.71
LSM4-201ENST00000252816 GTF3C3Q9Y5Q9 886 aa25.75■■□□□ 1.71
LSM4-201ENST00000252816 A0A0C4DFX4 3053 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 IGKV6-21A0A0C4DH24 114 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 RPS6KA5O75582 802 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 NPEPPSP55786 919 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 NFX1Q12986 1120 aaKnown RBP25.74■■□□□ 1.71
LSM4-201ENST00000252816 CTTNQ14247 550 aaKnown RBP25.74■■□□□ 1.71
LSM4-201ENST00000252816 ZNF579Q8NAF0 562 aaKnown RBP25.74■■□□□ 1.71
LSM4-201ENST00000252816 ZNF668Q96K58 619 aaPredicted RBP25.74■■□□□ 1.71
LSM4-201ENST00000252816 YME1L1Q96TA2 773 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 TSPYL2Q9H2G4 693 aaPredicted RBP25.74■■□□□ 1.71
LSM4-201ENST00000252816 UNC80Q8N2C7 3258 aa25.74■■□□□ 1.71
LSM4-201ENST00000252816 ERVK-21P61565 698 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 CYP4A11Q02928 519 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 ZNF174Q15697 407 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 FAM228AQ86W67 206 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 C4orf19Q8IY42 314 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 SLC17A8Q8NDX2 589 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 CYP26B1Q9NR63 512 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 MTUS1Q9ULD2 1270 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 ST3GAL5Q9UNP4 418 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 TTC3P53804 2025 aa25.73■■□□□ 1.71
LSM4-201ENST00000252816 ZBTB39O15060 712 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 MGEA5O60502 916 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 DKC1O60832 514 aaKnown RBP eCLIP25.72■■□□□ 1.71
LSM4-201ENST00000252816 MAFO75444 373 aaPredicted RBP25.72■■□□□ 1.71
LSM4-201ENST00000252816 SLITRK3O94933 977 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 U2AF2P26368 475 aaKnown RBP eCLIP25.72■■□□□ 1.71
LSM4-201ENST00000252816 GPC3P51654 580 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 GNL2Q13823 731 aaKnown RBP25.72■■□□□ 1.71
LSM4-201ENST00000252816 CRIPAKQ8N1N5 446 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 TGS1Q96RS0 853 aaKnown RBP25.72■■□□□ 1.71
LSM4-201ENST00000252816 HSD17B14Q9BPX1 270 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 EIF2AK1Q9BQI3 630 aaKnown RBP25.72■■□□□ 1.71
LSM4-201ENST00000252816 ZSWIM4Q9H7M6 989 aa25.72■■□□□ 1.71
LSM4-201ENST00000252816 GJB2P29033 226 aa25.71■■□□□ 1.71
LSM4-201ENST00000252816 YWHABP31946 246 aaKnown RBP25.71■■□□□ 1.71
LSM4-201ENST00000252816 TTC38Q5R3I4 469 aa25.71■■□□□ 1.71
LSM4-201ENST00000252816 C17orf80Q9BSJ5 609 aa25.71■■□□□ 1.71
LSM4-201ENST00000252816 RC3H2Q9HBD1 1191 aaKnown RBP25.71■■□□□ 1.71
LSM4-201ENST00000252816 POTEMA6NI47 508 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 GPR182O15218 404 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 LPXNO60711 386 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 TRAPPC10P48553 1259 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 NBR1Q14596 966 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 TPH2Q8IWU9 490 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 ZNF710Q8N1W2 664 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 CEP170P1Q96L14 293 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 KIF3AQ9Y496 699 aa25.7■■□□□ 1.7
LSM4-201ENST00000252816 REV3LO60673 3130 aa25.69■■□□□ 1.7
LSM4-201ENST00000252816 COL4A6Q14031 1691 aa25.69■■□□□ 1.7
LSM4-201ENST00000252816 EIF4BP23588 611 aaKnown RBP25.69■■□□□ 1.7
LSM4-201ENST00000252816 TOB1P50616 345 aaPredicted RBP25.69■■□□□ 1.7
LSM4-201ENST00000252816 GRB10Q13322 594 aa25.69■■□□□ 1.7
LSM4-201ENST00000252816 ORC2Q13416 577 aaPredicted RBP25.69■■□□□ 1.7
LSM4-201ENST00000252816 PPM1EQ8WY54 764 aa25.69■■□□□ 1.7
LSM4-201ENST00000252816 ADAM2Q99965 735 aa25.69■■□□□ 1.7
LSM4-201ENST00000252816 SUCLA2Q9P2R7 463 aaPredicted RBP25.69■■□□□ 1.7
LSM4-201ENST00000252816 OR52Z1P0C646 297 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 DARSP14868 501 aaKnown RBP25.68■■□□□ 1.7
LSM4-201ENST00000252816 POU3F3P20264 500 aaPredicted RBP25.68■■□□□ 1.7
LSM4-201ENST00000252816 ODR4Q5SWX8 454 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 NPAS4Q8IUM7 802 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 C4orf32Q8N8J7 132 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 GDPD5Q8WTR4 605 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 ZNF689Q96CS4 500 aaPredicted RBP25.68■■□□□ 1.7
LSM4-201ENST00000252816 DHX33Q9H6R0 707 aaKnown RBP25.68■■□□□ 1.7
LSM4-201ENST00000252816 NOL7Q9UMY1 257 aaKnown RBP25.68■■□□□ 1.7
LSM4-201ENST00000252816 MTCH2Q9Y6C9 303 aa25.68■■□□□ 1.7
LSM4-201ENST00000252816 DGKIO75912 1065 aa25.67■■□□□ 1.7
LSM4-201ENST00000252816 LYPLA2O95372 231 aa25.67■■□□□ 1.7
LSM4-201ENST00000252816 DNM2P50570 870 aa25.67■■□□□ 1.7
LSM4-201ENST00000252816 DSC3Q14574 896 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms