RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 LCA5LO95447 670 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 FERP16591 822 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 CHRNA5P30532 468 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 CETN1Q12798 172 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 ZFYVE27Q5T4F4 411 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 RINT1Q6NUQ1 792 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 PODNQ7Z5L7 613 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 AIPL1Q9NZN9 384 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 H0YIN7 160 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 TULP2O00295 520 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 MYL7Q01449 175 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 RBM46Q8TBY0 533 aaKnown RBP13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 LRRC45Q96CN5 670 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 RNPC3Q96LT9 517 aaKnown RBP13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 RAD17O75943 681 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 EYA4O95677 639 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 DHX9Q08211 1270 aaKnown RBP13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 CCDC127Q96BQ5 260 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 TMOD4Q9NZQ9 345 aa13.71□□□□□ -0.21
RAB3IP-201ENST00000247833 GOLGA8IPA6NC78 632 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 GOLGA8JA6NMD2 632 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 WHAMMQ8TF30 809 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 PBKQ96KB5 322 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 UBE2TQ9NPD8 197 aaPredicted RBP13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 SRCAPQ6ZRS2 3230 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 KIAA1551Q9HCM1 1747 aa13.71□□□□□ -0.22
RAB3IP-201ENST00000247833 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 IRF2BP2Q7Z5L9 587 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 TPCN2Q8NHX9 752 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 SELENOSQ9BQE4 189 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 EHMT1Q9H9B1 1298 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 FBXL5Q9UKA1 691 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 SORBS3O60504 671 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 APBA3O96018 575 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 MAGEA9P43362 315 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 GCLMP48507 274 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 ITIH3Q06033 890 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 MESDQ14696 234 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 TNIP1Q15025 636 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 PPM1KQ8N3J5 372 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 PRMT6Q96LA8 375 aaPredicted RBP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
RAB3IP-201ENST00000247833 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 BUB1BO60566 1050 aaPredicted RBP13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 GAP43P17677 238 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 SREBF1P36956 1147 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 CDR1P51861 262 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 PLTPP55058 493 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 MIER3Q7Z3K6 550 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 SLC35G2Q8TBE7 412 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 CAPN7Q9Y6W3 813 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 ASTN1O14525 1302 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 FMO5P49326 533 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 EPHA7Q15375 998 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 SH3BP5LQ7L8J4 393 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 ELMO3Q96BJ8 720 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 ZDHHC15Q96MV8 337 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 LXNQ9BS40 222 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 TRAF3IP3Q9Y228 551 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 LAMB1P07942 1786 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 A0A1W2PRG0 241 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 TISP43B9A030 160 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 SPOPO43791 374 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 IFT88Q13099 833 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 HYIQ5T013 277 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 PHLDB2Q86SQ0 1253 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
RAB3IP-201ENST00000247833 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 MYH1P12882 1939 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 ALAS1P13196 640 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 SOX5P35711 763 aa13.68□□□□□ -0.22
RAB3IP-201ENST00000247833 MNAT1P51948 309 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms