RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 NDUFA8P51970 172 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 TPM4P67936 248 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SART3Q15020 963 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 PPP2R5BQ15173 497 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 NTRK3Q16288 839 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 AKNAD1Q5T1N1 836 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SUSD4Q5VX71 490 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 RNF43Q68DV7 783 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 KRT40Q6A162 431 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 INTS5Q6P9B9 1019 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 OGFOD3Q6PK18 319 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ARHGAP27Q6ZUM4 889 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ZAR1Q86SH2 424 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 IFNL3Q8IZI9 196 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 CELF2-AS1Q8N7Q2 184 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 STAG1Q8WVM7 1258 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 UBE2Q2Q8WVN8 375 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 CDC5LQ99459 802 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 NOL10Q9BSC4 688 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ASCC2Q9H1I8 757 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 RNF41Q9H4P4 317 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SNTG2Q9NY99 539 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 HPSEQ9Y251 543 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 MORC2Q9Y6X9 1032 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SLIT2O94813 1529 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 NEDD4P46934 1319 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 CCDC196A0A1B0GTZ2 297 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 A0A1B0GVL5 298 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 GOLGA8AA7E2F4 631 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SMTNL1A8MU46 457 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 B4E1Z4 1266 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 KIF28PB7ZC32 967 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 IKBKBO14920 756 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF202O95125 648 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 MBD4O95243 580 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SLC3A2P08195 630 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 H2AFB2P0C5Z0 115 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 IFNAR1P17181 557 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 MTERF2Q49AM1 385 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 TMEM67Q5HYA8 995 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 SFRP5Q5T4F7 317 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 HEATR6Q6AI08 1181 aaKnown RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 TMED8Q6PL24 325 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 CDH24Q86UP0 819 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 C17orf53Q8N3J3 647 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 FBXL18Q96ME1 805 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 OSBPL5Q9H0X9 879 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 EPB41L4AQ9HCS5 686 aaPredicted RBP8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF652Q9Y2D9 606 aa8.97□□□□□ -0.97
CXCR4-201ENST00000241393 ZNF831Q5JPB2 1677 aa8.96□□□□□ -0.97
CXCR4-201ENST00000241393 ANKRD34BA5PLL1 514 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 GSG1L2A8MUP6 293 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 DYNC1LI2O43237 492 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-201ENST00000241393 CUTAO60888 179 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 NTSR2O95665 410 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 PFKFB1P16118 471 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 CRKLP46109 303 aaKnown RBP8.96□□□□□ -0.98
CXCR4-201ENST00000241393 SSRP1Q08945 709 aaKnown RBP8.96□□□□□ -0.98
CXCR4-201ENST00000241393 PTPAQ15257 358 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 SYCP1Q15431 976 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 MFSD6Q6ZSS7 791 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 LRRC8AQ8IWT6 810 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 TMEM192Q8IY95 271 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 MAGEB6Q8N7X4 407 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 CACTINQ8WUQ7 758 aaKnown RBP8.96□□□□□ -0.98
CXCR4-201ENST00000241393 SYTL4Q96C24 671 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-201ENST00000241393 APBA2Q99767 749 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 TUBE1Q9UJT0 475 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 ANAPC4Q9UJX5 808 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 PAXBP1Q9Y5B6 917 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 BCL9LQ86UU0 1499 aa8.96□□□□□ -0.98
CXCR4-201ENST00000241393 HMX2A2RU54 273 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 CCDC69A6NI79 296 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 IFIT3O14879 490 aaKnown RBP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 CTIFO43310 598 aaKnown RBP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 CLSTN1O94985 981 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 PCP11498 1178 aaKnown RBP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 SYKP43405 635 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 KCNJ6P48051 423 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 SAFBQ15424 915 aaKnown RBP eCLIP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 DDB1Q16531 1140 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 MICU3Q86XE3 530 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 CRACR2BQ8N4Y2 399 aaPredicted RBP8.95□□□□□ -0.98
CXCR4-201ENST00000241393 AOPEPQ8N6M6 819 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 PPP1R13LQ8WUF5 828 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 MAP3K14Q99558 947 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 ZSWIM5Q9P217 1185 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 NRBP1Q9UHY1 535 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 NRAPQ86VF7 1730 aa8.95□□□□□ -0.98
CXCR4-201ENST00000241393 ZNF804BA4D1E1 1349 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms