RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 TBCCQ15814 346 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TTC8Q8TAM2 541 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 SNX19Q92543 992 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 THOC1Q96FV9 657 aaKnown RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF408Q9H9D4 720 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 PIK3R2O00459 728 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 KRT8P05787 483 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 ALKBH5Q6P6C2 394 aaKnown RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 SARM1Q6SZW1 724 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 STX19Q8N4C7 294 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 USP6NLQ92738 828 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 STAMBPL1Q96FJ0 436 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 KIF2CQ99661 725 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TRPV6Q9H1D0 765 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TRIM45Q9H8W5 580 aaPredicted RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 ATP6V0A4Q9HBG4 840 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TRAF3IP3Q9Y228 551 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF608Q9ULD9 1512 aaPredicted RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 BEND6Q5SZJ8 279 aaPredicted RBP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 CDC26Q8NHZ8 85 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 FAF2Q96CS3 445 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 ATP6V1G3Q96LB4 118 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 SENP1Q9P0U3 644 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 RCOR1Q9UKL0 485 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.21□□□□□ -1.26
CSMD2-201ENST00000241312 LIFRP42702 1097 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TRPC1P48995 793 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 COPS2P61201 443 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 CNGA3Q16281 694 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 TMC4Q7Z404 712 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 PAGE5Q96GU1 130 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 GPR108Q9NPR9 543 aa7.21□□□□□ -1.26
CSMD2-201ENST00000241312 RNF103-CHMP3A0A140T963 221 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 EIF4E1BA6NMX2 242 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SOX5P35711 763 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 FOXD4Q12950 439 aaPredicted RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 MSTO1Q9BUK6 570 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 LRRC4Q9HBW1 653 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SERPINI2O75830 405 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 HLA-DPA1P20036 260 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 GTF2IP78347 998 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 TMED8Q6PL24 325 aaPredicted RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 RNF139Q8WU17 664 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PLEKHG1Q9ULL1 1385 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CDC42BPBQ9Y5S2 1711 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CIITAP33076 1130 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 MAGOHP61326 146 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 NDUFAF2Q8N183 169 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 GINM1Q9NU53 330 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 DNAJC17Q9NVM6 304 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 ZNF804BA4D1E1 1349 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 RASSF10A6NK89 507 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SCNN1DP51172 638 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 TBC1D9BQ66K14 1250 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 ATP11CQ8NB49 1132 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 EXT2Q93063 718 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 BLOC1S6Q9UL45 172 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PRPF3O43395 683 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SNX2O60749 519 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 KIRREL3Q8IZU9 778 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 TBCKQ8TEA7 893 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PALMO75781 387 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 MRPL28Q13084 256 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 IRAK4Q9NWZ3 460 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 A1BGP04217 495 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PRKG1Q13976 671 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 RWDD4Q6NW29 188 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 HIPK4Q8NE63 616 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SNF8Q96H20 258 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CHCHD3Q9NX63 227 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CACNA1FO60840 1977 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 HNRNPRO43390 633 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PSMC1P62191 440 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CAPRIN1Q14444 709 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 ANKARQ7Z5J8 1434 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 NR3C1P04150 777 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 MYBL1P10243 752 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 LMCD1Q9NZU5 365 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 FNDC3AQ9Y2H6 1198 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 PLA2G4BP0C869 781 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 CHRNDQ07001 517 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 ARID5BQ14865 1188 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 SZRD1Q7Z422 152 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 TTC39CQ8N584 583 aa7.2□□□□□ -1.26
CSMD2-201ENST00000241312 HEXIM2Q96MH2 286 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 DBNLQ9UJU6 430 aaKnown RBP7.2□□□□□ -1.26
CSMD2-201ENST00000241312 IFNAR1P17181 557 aa7.19□□□□□ -1.26
CSMD2-201ENST00000241312 MAPRE2Q15555 327 aa7.19□□□□□ -1.26
CSMD2-201ENST00000241312 ADCK5Q3MIX3 580 aa7.19□□□□□ -1.26
CSMD2-201ENST00000241312 ITPRIPL1Q6GPH6 555 aa7.19□□□□□ -1.26
CSMD2-201ENST00000241312 ELMSAN1Q6PJG2 1045 aa7.19□□□□□ -1.26
CSMD2-201ENST00000241312 RGS9BPQ6ZS82 235 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms