RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 TUBA8Q9NY65 449 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 INTUQ9ULD6 942 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TTC7AQ9ULT0 858 aaPredicted RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TMED5Q9Y3A6 229 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 DUSP10Q9Y6W6 482 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 LRRC53A6NM62 1247 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 USP17L21D6R901 530 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC188H7C350 402 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ADAMTS3O15072 1205 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TOM1O60784 492 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 GFPT2O94808 682 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NPEPPSP55786 919 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 DYNLL1P63167 89 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ASIC1P78348 528 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ADCY1Q08828 1119 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 E2F5Q15329 346 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 EZH2Q15910 746 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 IFI16Q16666 785 aaKnown RBP6.84□□□□□ -1.31
SGIP1-201ENST00000237247 C12orf60Q5U649 245 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 TYW1BQ6NUM6 668 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 NEK8Q86SG6 692 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 C2CD5Q86YS7 1000 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 SLF2Q8IX21 1173 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 SCFD2Q8WU76 684 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 LRRC45Q96CN5 670 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 IFT43Q96FT9 208 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 ATP6V0A2Q9Y487 856 aa6.84□□□□□ -1.31
SGIP1-201ENST00000237247 A0A1B0GVG6 124 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 H0YGN5 161 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 PLSCR1O15162 318 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 TPPPO94811 219 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 CRKLP46109 303 aaKnown RBP6.84□□□□□ -1.32
SGIP1-201ENST00000237247 USP11P51784 963 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 PPP4CP60510 307 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 CYP27A1Q02318 531 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 SLC18A3Q16572 532 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 TXNRD1Q16881 649 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 SV2BQ7L1I2 683 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 OTUD6AQ7L8S5 288 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 RASGEF1CQ8N431 466 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 USP38Q8NB14 1042 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 PNMA1Q8ND90 353 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 NEK9Q8TD19 979 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 MTMR8Q96EF0 704 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 TAF1DQ9H5J8 278 aaPredicted RBP6.84□□□□□ -1.32
SGIP1-201ENST00000237247 BLOC1S4Q9NUP1 217 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.32
SGIP1-201ENST00000237247 SWAP70Q9UH65 585 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 NFS1Q9Y697 457 aa6.84□□□□□ -1.32
SGIP1-201ENST00000237247 BZW2Q9Y6E2 419 aaKnown RBP6.84□□□□□ -1.32
SGIP1-201ENST00000237247 AKR1B10O60218 316 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 BUB1BO60566 1050 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 COBLO75128 1261 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SMIM24O75264 130 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 GRB10Q13322 594 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 CLUL1Q15846 466 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SLC35G1Q2M3R5 365 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ANKRD20A8PQ5CZ79 823 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 RUFY4Q6ZNE9 571 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 NLRP14Q86W24 1093 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 MAIP1Q8WWC4 291 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 RAD54LQ92698 747 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 OPTNQ96CV9 577 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 TBC1D31Q96DN5 1066 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 FAM84BQ96KN1 310 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 NAP1L4Q99733 375 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SLITRK6Q9H5Y7 841 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 C6orf50Q9HD87 102 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 DMAP1Q9NPF5 467 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 IL17RBQ9NRM6 502 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ZNF652Q9Y2D9 606 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 TESPA1A2RU30 521 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 HEXIM1O94992 359 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ANP32DO95626 131 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 BCRP11274 1271 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ECHS1P30084 290 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ABL2P42684 1182 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ELF3P78545 371 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 MRPS35P82673 323 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 KCNMA1Q12791 1236 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 INF2Q27J81 1249 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 APBB1IPQ7Z5R6 666 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 CASKIN2Q8WXE0 1202 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 STAMBPL1Q96FJ0 436 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 RNPC3Q96LT9 517 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 CCDC43Q96MW1 224 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 OXCT2Q9BYC2 517 aaPredicted RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 RAB34Q9BZG1 259 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ANKRD2Q9GZV1 360 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 TFR2Q9UP52 801 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 DIS3Q9Y2L1 958 aaKnown RBP6.83□□□□□ -1.32
SGIP1-201ENST00000237247 SAMM50Q9Y512 469 aa6.83□□□□□ -1.32
SGIP1-201ENST00000237247 ZSWIM8A7E2V4 1837 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms